RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SNX29Q8TEQ0 813 aa15.46■□□□□ 0.06
NPC1-201ENST00000269228 TPCN1Q9ULQ1 816 aa15.46■□□□□ 0.06
NPC1-201ENST00000269228 MAP4K1Q92918 833 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 LSG1Q9H089 658 aaKnown RBP15.45■□□□□ 0.06
NPC1-201ENST00000269228 NARFQ9UHQ1 456 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 TRAF5O00463 557 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 EPHA10Q5JZY3 1008 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 SYNE4Q8N205 404 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 SETBP1Q9Y6X0 1596 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 CRB1P82279 1406 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 KLRF2D3W0D1 207 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 RAD17O75943 681 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 ZNF589Q86UQ0 364 aaPredicted RBP15.45■□□□□ 0.06
NPC1-201ENST00000269228 SULF1Q8IWU6 871 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 GPR101Q96P66 508 aaPredicted RBP15.45■□□□□ 0.06
NPC1-201ENST00000269228 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 MAPK8IP1Q9UQF2 711 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 GSTTP1A0A1W2PQM5 241 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 NOP56O00567 594 aaKnown RBP15.45■□□□□ 0.06
NPC1-201ENST00000269228 HARSP12081 509 aaKnown RBP15.45■□□□□ 0.06
NPC1-201ENST00000269228 CERKQ8TCT0 537 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 CRACR2AQ9BSW2 395 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 AS3MTQ9HBK9 375 aa15.45■□□□□ 0.06
NPC1-201ENST00000269228 M0R2C6 588 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 CYP19A1P11511 503 aaPredicted RBP15.44■□□□□ 0.06
NPC1-201ENST00000269228 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
NPC1-201ENST00000269228 CALCRLQ16602 461 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 GBP3Q9H0R5 595 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 CCDC169A6NNP5 214 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 RASEFQ8IZ41 740 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 XRCC6P12956 609 aaKnown RBP eCLIP15.44■□□□□ 0.06
NPC1-201ENST00000269228 NPR1P16066 1061 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 CA8P35219 290 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 TMCO3Q6UWJ1 677 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
NPC1-201ENST00000269228 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 PTCH1Q13635 1447 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 RPL13P26373 211 aaKnown RBP15.44■□□□□ 0.06
NPC1-201ENST00000269228 ADD2P35612 726 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 POLA2Q14181 598 aa15.44■□□□□ 0.06
NPC1-201ENST00000269228 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
NPC1-201ENST00000269228 ADCY9O60503 1353 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 ARHGEF35A5YM69 484 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 ADCK5Q3MIX3 580 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 DCAF17Q5H9S7 520 aaPredicted RBP15.43■□□□□ 0.06
NPC1-201ENST00000269228 MAEAQ7L5Y9 396 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 JCADQ9P266 1359 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 PRKAB2O43741 272 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 MYL5Q02045 173 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 CEP135Q66GS9 1140 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 DPH6Q7L8W6 267 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 NEK11Q8NG66 645 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 COL15A1P39059 1388 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 PFKFB2O60825 505 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 ABCB5Q2M3G0 1257 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 CSRNP1Q96S65 589 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 CYP21A2P08686 494 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 ALAS1P13196 640 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 DIXDC1Q155Q3 683 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 CCDC93Q567U6 631 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 ZSWIM4Q9H7M6 989 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 GINS2Q9Y248 185 aa15.43■□□□□ 0.06
NPC1-201ENST00000269228 RASGRF1Q13972 1273 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 ZMYND15Q9H091 742 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 CTNND2Q9UQB3 1225 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 LCORLQ8N3X6 602 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 ARHGEF40Q8TER5 1519 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 BRDTQ58F21 947 aaPredicted RBP15.42■□□□□ 0.06
NPC1-201ENST00000269228 SLFN13Q68D06 897 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 PUS7LQ9H0K6 701 aaKnown RBP15.42■□□□□ 0.06
NPC1-201ENST00000269228 ZMYM6O95789 1325 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 ZNF202O95125 648 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 GBP2P32456 591 aaPredicted RBP15.42■□□□□ 0.06
NPC1-201ENST00000269228 SMTNP53814 917 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 IFI16Q16666 785 aaKnown RBP15.42■□□□□ 0.06
NPC1-201ENST00000269228 MYSM1Q5VVJ2 828 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 EHBP1Q8NDI1 1231 aa15.42■□□□□ 0.06
NPC1-201ENST00000269228 ARHGEF1Q92888 912 aaKnown RBP15.42■□□□□ 0.06
NPC1-201ENST00000269228 GPKOWQ92917 476 aaPredicted RBP eCLIP15.42■□□□□ 0.062e-6■■■■□ 21.7
NPC1-201ENST00000269228 RAD51AP2Q09MP3 1159 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 LEKR1Q6ZMV7 388 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 RGS22Q8NE09 1264 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 OSBP2Q969R2 916 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 AGLP35573 1532 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 HLTFQ14527 1009 aaKnown RBP eCLIP15.41■□□□□ 0.063e-6■■□□□ 14.1
NPC1-201ENST00000269228 DYMQ7RTS9 669 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 STAMQ92783 540 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 TSPYL1Q9H0U9 437 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 GPHNQ9NQX3 736 aaPredicted RBP15.41■□□□□ 0.06
NPC1-201ENST00000269228 PNPLA6Q8IY17 1366 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 SNAP23O00161 211 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 TTLL6Q8N841 843 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 MASTLQ96GX5 879 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 PSTPIP2Q9H939 334 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms