RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 PHKBQ93100 1093 aa23.95■■□□□ 1.42
LYSMD2-201ENST00000267838 ECM29Q5VYK3 1845 aa23.95■■□□□ 1.42
LYSMD2-201ENST00000267838 GADD45BO75293 160 aaPredicted RBP23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 IFNAR1P17181 557 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 CRKP46108 304 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 CATIPQ7Z7H3 387 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 KIAA0825Q8IV33 1275 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 RGS22Q8NE09 1264 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 MRIQ9BWK5 157 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 USP40Q9NVE5 1235 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 STK36Q9NRP7 1315 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 MYH15Q9Y2K3 1946 aa23.94■■□□□ 1.42
LYSMD2-201ENST00000267838 ESPNB1AK53 854 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 NMT2O60551 498 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 NASPP49321 788 aaPredicted RBP23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 TFAP4Q01664 338 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 PPP2R5BQ15173 497 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 FBXO18Q8NFZ0 1043 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 ZNF287Q9HBT7 754 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 SSRP1Q08945 709 aaKnown RBP23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 APOBEC3HQ6NTF7 200 aaKnown RBP23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 CAVIN1Q6NZI2 390 aaKnown RBP23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 C16orf86Q6ZW13 317 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 ALG1Q9BT22 464 aa23.93■■□□□ 1.42
LYSMD2-201ENST00000267838 WDHD1O75717 1129 aaPredicted RBP23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 FMNL1O95466 1100 aaPredicted RBP23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 HDLBPQ00341 1268 aaKnown RBP23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 PICALMQ13492 652 aa23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 R3HDM1Q15032 1099 aaKnown RBP23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 CDC42EP5Q6NZY7 148 aa23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 SLC44A5Q8NCS7 719 aa23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 ZDHHC15Q96MV8 337 aa23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 PPP1R9BQ96SB3 815 aa23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 PIM2Q9P1W9 311 aa23.92■■□□□ 1.42
LYSMD2-201ENST00000267838 YDJCA8MPS7 323 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 DDAH1O94760 285 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 CALM1P0DP23 149 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 CALM2P0DP24 149 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 CALM3P0DP25 149 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 CDK8P49336 464 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 SOGA3Q5TF21 947 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 OTUD7BQ6GQQ9 843 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 SLC26A6Q9BXS9 759 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 PSME4Q14997 1843 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 RASA1P20936 1047 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 UBE2HP62256 183 aa23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 SCAND2PQ9GZW5 306 aaPredicted RBP23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 DDX4Q9NQI0 724 aaKnown RBP23.91■■□□□ 1.42
LYSMD2-201ENST00000267838 TSPY3P0CV98 308 aa23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 TSPY8P0CW00 308 aa23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 TROAPQ12815 778 aa23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 CCDC178Q5BJE1 867 aa23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 AIFM3Q96NN9 605 aa23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 IL17RBQ9NRM6 502 aa23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 TCP11L1Q9NUJ3 509 aa23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 TFIP11Q9UBB9 837 aaKnown RBP23.9■■□□□ 1.42
LYSMD2-201ENST00000267838 RCSD1Q6JBY9 416 aa23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 NBPF11Q86T75 865 aa23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 TTC6Q86TZ1 520 aa23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 DGKHQ86XP1 1220 aa23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 TRIM22Q8IYM9 498 aa23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 CRACR2BQ8N4Y2 399 aaPredicted RBP23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 WASF1Q92558 559 aa23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 GJB4Q9NTQ9 266 aa23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 RBM28Q9NW13 759 aaKnown RBP23.89■■□□□ 1.42
LYSMD2-201ENST00000267838 ELP1O95163 1332 aa23.89■■□□□ 1.41
LYSMD2-201ENST00000267838 ZSCAN23Q3MJ62 389 aa23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 ANKS1AQ92625 1134 aa23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 VPS33BQ9H267 617 aa23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 ZNF277Q9NRM2 450 aaPredicted RBP23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 RBM27Q9P2N5 1060 aaKnown RBP23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 SERPINA10Q9UK55 444 aa23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 LARGE2Q8N3Y3 721 aa23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 SPATA32Q96LK8 384 aa23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 CFAP45Q9UL16 551 aa23.88■■□□□ 1.41
LYSMD2-201ENST00000267838 RBM5P52756 815 aaKnown RBP eCLIP23.87■■□□□ 1.41
LYSMD2-201ENST00000267838 CMTR1Q8N1G2 835 aaKnown RBP23.87■■□□□ 1.41
LYSMD2-201ENST00000267838 OSBPL5Q9H0X9 879 aaPredicted RBP23.87■■□□□ 1.41
LYSMD2-201ENST00000267838 BRCA1P38398 1863 aaKnown RBP23.87■■□□□ 1.41
LYSMD2-201ENST00000267838 DALRD3Q5D0E6 543 aaKnown RBP23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 KRT40Q6A162 431 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 ATL3Q6DD88 541 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 CCDC82Q8N4S0 544 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 LEO1Q8WVC0 666 aaPredicted RBP23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 KAT14Q9H8E8 782 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 TMEM63CQ9P1W3 806 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 PCDHAC2Q9Y5I4 1007 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 COL4A5P29400 1685 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 UBE2Q2LH0YL09 131 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 DEXIO95424 95 aa23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 ZNF396Q96N95 335 aaPredicted RBP23.86■■□□□ 1.41
LYSMD2-201ENST00000267838 GUCY1A2P33402 732 aa23.85■■□□□ 1.41
LYSMD2-201ENST00000267838 KIF23Q02241 960 aaPredicted RBP23.85■■□□□ 1.41
LYSMD2-201ENST00000267838 TRIM29Q14134 588 aa23.85■■□□□ 1.41
LYSMD2-201ENST00000267838 BRAPQ7Z569 592 aa23.85■■□□□ 1.41
LYSMD2-201ENST00000267838 CTCFLQ8NI51 663 aaPredicted RBP23.85■■□□□ 1.41
LYSMD2-201ENST00000267838 RNF26Q9BY78 433 aaPredicted RBP23.85■■□□□ 1.41
LYSMD2-201ENST00000267838 PSDA5PKW4 1024 aaPredicted RBP23.84■■□□□ 1.41
LYSMD2-201ENST00000267838 GABPAQ06546 454 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms