RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ZMYM6O95789 1325 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 CDC27P30260 824 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 EXOSC10Q01780 885 aaKnown RBP22.49■■□□□ 1.19
CSPG5-201ENST00000264723 DHX40Q8IX18 779 aaKnown RBP22.49■■□□□ 1.19
CSPG5-201ENST00000264723 EPC1Q9H2F5 836 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 ETF1P62495 437 aaKnown RBP22.48■■□□□ 1.19
CSPG5-201ENST00000264723 KRBA2Q6ZNG9 492 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 TGFBRAP1Q8WUH2 860 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 TRIM47Q96LD4 638 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 ERLIN1O75477 346 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 RASGRF1Q13972 1273 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 RABL6Q3YEC7 729 aaPredicted RBP22.48■■□□□ 1.19
CSPG5-201ENST00000264723 ZNF654Q8IZM8 581 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 CTNND2Q9UQB3 1225 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 CDC25AP30304 524 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 ADD2P35612 726 aa22.48■■□□□ 1.19
CSPG5-201ENST00000264723 DYNLL1P63167 89 aaKnown RBP22.48■■□□□ 1.19
CSPG5-201ENST00000264723 RIMS1Q86UR5 1692 aaKnown RBP22.48■■□□□ 1.19
CSPG5-201ENST00000264723 WDHD1O75717 1129 aaPredicted RBP22.47■■□□□ 1.19
CSPG5-201ENST00000264723 HLA-DOAP06340 250 aa22.47■■□□□ 1.19
CSPG5-201ENST00000264723 STAT6P42226 847 aa22.47■■□□□ 1.19
CSPG5-201ENST00000264723 DEXIO95424 95 aa22.47■■□□□ 1.19
CSPG5-201ENST00000264723 TFAP4Q01664 338 aa22.47■■□□□ 1.19
CSPG5-201ENST00000264723 CAPZA3Q96KX2 299 aa22.47■■□□□ 1.19
CSPG5-201ENST00000264723 CCDC178Q5BJE1 867 aa22.47■■□□□ 1.19
CSPG5-201ENST00000264723 MTIF2P46199 727 aaKnown RBP22.47■■□□□ 1.19
CSPG5-201ENST00000264723 LEKR1Q6ZMV7 388 aa22.47■■□□□ 1.19
CSPG5-201ENST00000264723 AKR1B15C9JRZ8 316 aaPredicted RBP22.46■■□□□ 1.19
CSPG5-201ENST00000264723 RBM6P78332 1123 aaKnown RBP22.46■■□□□ 1.19
CSPG5-201ENST00000264723 PPP2R3AQ06190 1150 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 FBXO38Q6PIJ6 1188 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 HINFPQ9BQA5 517 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 RTL9Q8NET4 1388 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 PXDNQ92626 1479 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 SEC31AO94979 1220 aaKnown RBP22.46■■□□□ 1.19
CSPG5-201ENST00000264723 SAMSN1Q9NSI8 373 aaKnown RBP22.46■■□□□ 1.19
CSPG5-201ENST00000264723 FBXO3Q9UK99 471 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 TNKSO95271 1327 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 UBE3CQ15386 1083 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 TAB2Q9NYJ8 693 aa22.46■■□□□ 1.19
CSPG5-201ENST00000264723 LCORLQ8N3X6 602 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 FANCBQ8NB91 859 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.45■■□□□ 1.18
CSPG5-201ENST00000264723 PCDHB6Q9Y5E3 794 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 DPF2Q92785 391 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 RUFY1Q96T51 708 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 TNNI2P48788 182 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 UBXN1Q04323 297 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 TMEM266Q2M3C6 531 aa22.45■■□□□ 1.18
CSPG5-201ENST00000264723 CALM1P0DP23 149 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 CALM2P0DP24 149 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 CALM3P0DP25 149 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 CYP19A1P11511 503 aaPredicted RBP22.44■■□□□ 1.18
CSPG5-201ENST00000264723 KCNB2Q92953 911 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 TRIM21P19474 475 aaKnown RBP22.44■■□□□ 1.18
CSPG5-201ENST00000264723 LETM2Q2VYF4 491 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 FAM196AQ6ZSG2 479 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 ACBD3Q9H3P7 528 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 GNAQP50148 359 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 FKBP15Q5T1M5 1219 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 GGA1Q9UJY5 639 aa22.44■■□□□ 1.18
CSPG5-201ENST00000264723 SPECC1LQ69YQ0 1117 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 GPCPD1Q9NPB8 672 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 SH2B2O14492 632 aaPredicted RBP22.43■■□□□ 1.18
CSPG5-201ENST00000264723 MB21D2Q8IYB1 491 aaPredicted RBP22.43■■□□□ 1.18
CSPG5-201ENST00000264723 CSRNP2Q9H175 543 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 PPP2R2CQ9Y2T4 447 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 ARHGAP6O43182 974 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 CALML4Q96GE6 196 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 ISCA1Q9BUE6 129 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 JADE2Q9NQC1 790 aa22.43■■□□□ 1.18
CSPG5-201ENST00000264723 GOLGA6L9A6NEM1 432 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 CCDC181Q5TID7 509 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 GDAP1L1Q96MZ0 367 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 NEDD4P46934 1319 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 GUCY1A2P33402 732 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 GPR101Q96P66 508 aaPredicted RBP22.42■■□□□ 1.18
CSPG5-201ENST00000264723 RAB34Q9BZG1 259 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 CDC25BP30305 580 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 EPSTI1Q96J88 318 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 CENPHQ9H3R5 247 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 EIF3JO75822 258 aaKnown RBP22.42■■□□□ 1.18
CSPG5-201ENST00000264723 ARMCX5Q6P1M9 558 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 MLKLQ8NB16 471 aa22.42■■□□□ 1.18
CSPG5-201ENST00000264723 KNDC1Q76NI1 1749 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 GTF2IP78347 998 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 TCP10Q12799 353 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 ITSN1Q15811 1721 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 SLF1Q9BQI6 1058 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 CALML3P27482 149 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 IQUBQ8NA54 791 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 CCDC148Q8NFR7 591 aa22.41■■□□□ 1.18
CSPG5-201ENST00000264723 UTYO14607 1347 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 ANTXR2P58335 489 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 ASIC1P78348 528 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 TTC38Q5R3I4 469 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 WDR66Q8TBY9 1149 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 GOLGA1Q92805 767 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms