RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 TFAP4Q01664 338 aa26.65■■□□□ 1.86
UFD1-201ENST00000263202 PI4KBQ9UBF8 816 aa26.65■■□□□ 1.86
UFD1-201ENST00000263202 SWAP70Q9UH65 585 aa26.65■■□□□ 1.86
UFD1-201ENST00000263202 PFKFB2O60825 505 aa26.65■■□□□ 1.86
UFD1-201ENST00000263202 WTAPQ15007 396 aa26.65■■□□□ 1.86
UFD1-201ENST00000263202 FAM83AQ86UY5 434 aa26.64■■□□□ 1.85
UFD1-201ENST00000263202 GTF3C6Q969F1 213 aa26.64■■□□□ 1.85
UFD1-201ENST00000263202 ENAHQ8N8S7 591 aaPredicted RBP26.63■■□□□ 1.85
UFD1-201ENST00000263202 NAP1L2Q9ULW6 460 aaPredicted RBP26.63■■□□□ 1.85
UFD1-201ENST00000263202 EPS15P42566 896 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 SCRN1Q12765 414 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 TMTC2Q8N394 836 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 DNAJC18Q9H819 358 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.62■■□□□ 1.85
UFD1-201ENST00000263202 NMT2O60551 498 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 TSPY3P0CV98 308 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 TSPY8P0CW00 308 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 SHMT1P34896 483 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 APOA5Q6Q788 366 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 NFXL1Q6ZNB6 911 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 METTL16Q86W50 562 aaKnown RBP26.62■■□□□ 1.85
UFD1-201ENST00000263202 FOXP4Q8IVH2 680 aaPredicted RBP26.62■■□□□ 1.85
UFD1-201ENST00000263202 CWC22Q9HCG8 908 aaKnown RBP26.62■■□□□ 1.85
UFD1-201ENST00000263202 TAOK2Q9UL54 1235 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 HPS5Q9UPZ3 1129 aa26.62■■□□□ 1.85
UFD1-201ENST00000263202 CCDC69A6NI79 296 aa26.61■■□□□ 1.85
UFD1-201ENST00000263202 SLURP2P0DP57 97 aa26.61■■□□□ 1.85
UFD1-201ENST00000263202 CRACR2BQ8N4Y2 399 aaPredicted RBP26.61■■□□□ 1.85
UFD1-201ENST00000263202 TRPM4Q8TD43 1214 aa26.61■■□□□ 1.85
UFD1-201ENST00000263202 IL17RBQ9NRM6 502 aa26.61■■□□□ 1.85
UFD1-201ENST00000263202 TCP11L1Q9NUJ3 509 aa26.61■■□□□ 1.85
UFD1-201ENST00000263202 ASTN2O75129 1339 aaPredicted RBP26.61■■□□□ 1.85
UFD1-201ENST00000263202 GOLGA8BA8MQT2 603 aa26.6■■□□□ 1.85
UFD1-201ENST00000263202 CSRNP1Q96S65 589 aa26.6■■□□□ 1.85
UFD1-201ENST00000263202 GREB1LQ9C091 1923 aaPredicted RBP26.6■■□□□ 1.85
UFD1-201ENST00000263202 ZC3H4Q9UPT8 1303 aaKnown RBP26.6■■□□□ 1.85
UFD1-201ENST00000263202 CCT2P78371 535 aaKnown RBP26.6■■□□□ 1.85
UFD1-201ENST00000263202 NEDD1Q8NHV4 660 aa26.6■■□□□ 1.85
UFD1-201ENST00000263202 TMEM39BQ9GZU3 492 aa26.6■■□□□ 1.85
UFD1-201ENST00000263202 HACL1Q9UJ83 578 aa26.6■■□□□ 1.85
UFD1-201ENST00000263202 TNNI2P48788 182 aa26.59■■□□□ 1.85
UFD1-201ENST00000263202 IFIT1BQ5T764 474 aaKnown RBP26.59■■□□□ 1.85
UFD1-201ENST00000263202 DPY19L2Q6NUT2 758 aa26.59■■□□□ 1.85
UFD1-201ENST00000263202 PGAP2Q9UHJ9 254 aa26.59■■□□□ 1.85
UFD1-201ENST00000263202 SLC12A7Q9Y666 1083 aa26.59■■□□□ 1.85
UFD1-201ENST00000263202 RCSD1Q6JBY9 416 aa26.58■■□□□ 1.85
UFD1-201ENST00000263202 NCOA5Q9HCD5 579 aaKnown RBP26.58■■□□□ 1.85
UFD1-201ENST00000263202 PLIN4Q96Q06 1357 aa26.58■■□□□ 1.85
UFD1-201ENST00000263202 FAM196BA6NMK8 535 aa26.58■■□□□ 1.84
UFD1-201ENST00000263202 LMOD1P29536 600 aaPredicted RBP26.58■■□□□ 1.84
UFD1-201ENST00000263202 TNFAIP1Q13829 316 aa26.58■■□□□ 1.84
UFD1-201ENST00000263202 CCDC178Q5BJE1 867 aa26.58■■□□□ 1.84
UFD1-201ENST00000263202 RAB11FIP4Q86YS3 637 aa26.58■■□□□ 1.84
UFD1-201ENST00000263202 TRIM34Q9BYJ4 488 aa26.58■■□□□ 1.84
UFD1-201ENST00000263202 ZBTB43O43298 467 aa26.57■■□□□ 1.84
UFD1-201ENST00000263202 AKR1B1P15121 316 aa26.57■■□□□ 1.84
UFD1-201ENST00000263202 TATDN1Q6P1N9 297 aa26.57■■□□□ 1.84
UFD1-201ENST00000263202 DGKHQ86XP1 1220 aa26.57■■□□□ 1.84
UFD1-201ENST00000263202 SCAF8Q9UPN6 1271 aaKnown RBP26.57■■□□□ 1.84
UFD1-201ENST00000263202 SMC3Q9UQE7 1217 aa26.57■■□□□ 1.84
UFD1-201ENST00000263202 HIRAP54198 1017 aaPredicted RBP26.56■■□□□ 1.84
UFD1-201ENST00000263202 RASA3Q14644 834 aa26.56■■□□□ 1.84
UFD1-201ENST00000263202 SYNE3Q6ZMZ3 975 aa26.56■■□□□ 1.84
UFD1-201ENST00000263202 CDAN1Q8IWY9 1227 aa26.56■■□□□ 1.84
UFD1-201ENST00000263202 ZNF654Q8IZM8 581 aa26.56■■□□□ 1.84
UFD1-201ENST00000263202 ANKS1AQ92625 1134 aa26.56■■□□□ 1.84
UFD1-201ENST00000263202 MYL10Q9BUA6 226 aa26.56■■□□□ 1.84
UFD1-201ENST00000263202 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.56■■□□□ 1.84
UFD1-201ENST00000263202 CHMP5Q9NZZ3 219 aa26.56■■□□□ 1.84
UFD1-201ENST00000263202 CIZ1Q9ULV3 898 aaPredicted RBP26.56■■□□□ 1.84
UFD1-201ENST00000263202 DTNBO60941 627 aa26.55■■□□□ 1.84
UFD1-201ENST00000263202 MICU3Q86XE3 530 aa26.55■■□□□ 1.84
UFD1-201ENST00000263202 L3MBTL3Q96JM7 780 aaPredicted RBP26.55■■□□□ 1.84
UFD1-201ENST00000263202 ADARB2Q9NS39 739 aaKnown RBP26.55■■□□□ 1.84
UFD1-201ENST00000263202 HERC5Q9UII4 1024 aaKnown RBP26.55■■□□□ 1.84
UFD1-201ENST00000263202 NID2Q14112 1375 aa26.55■■□□□ 1.84
UFD1-201ENST00000263202 RXRAP19793 462 aa26.55■■□□□ 1.84
UFD1-201ENST00000263202 METAP2P50579 478 aaKnown RBP eCLIP26.55■■□□□ 1.84
UFD1-201ENST00000263202 CHMP4CQ96CF2 233 aa26.55■■□□□ 1.84
UFD1-201ENST00000263202 CCDC17Q96LX7 622 aa26.55■■□□□ 1.84
UFD1-201ENST00000263202 LLPHQ9BRT6 129 aaKnown RBP26.55■■□□□ 1.84
UFD1-201ENST00000263202 CTDNEP1O95476 244 aa26.54■■□□□ 1.84
UFD1-201ENST00000263202 ANGEL2Q5VTE6 544 aaKnown RBP26.54■■□□□ 1.84
UFD1-201ENST00000263202 POLR2AP24928 1970 aaKnown RBP26.54■■□□□ 1.84
UFD1-201ENST00000263202 GLTPD2A6NH11 291 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 GJB2P29033 226 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 RCAN1P53805 252 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 TEPSINQ96N21 525 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 IGKV6D-41A0A0C4DH26 115 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 GOLGA8AA7E2F4 631 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 NOVP48745 357 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 CERKLQ49MI3 558 aaPredicted RBP26.53■■□□□ 1.84
UFD1-201ENST00000263202 APOBEC3FQ8IUX4 373 aaKnown RBP26.53■■□□□ 1.84
UFD1-201ENST00000263202 NSUN7Q8NE18 718 aaKnown RBP26.53■■□□□ 1.84
UFD1-201ENST00000263202 CEP95Q96GE4 821 aa26.53■■□□□ 1.84
UFD1-201ENST00000263202 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.53■■□□□ 1.84
UFD1-201ENST00000263202 SCN4AP35499 1836 aa26.52■■□□□ 1.84
UFD1-201ENST00000263202 TBC1D12O60347 775 aa26.52■■□□□ 1.84
UFD1-201ENST00000263202 CATIPQ7Z7H3 387 aa26.52■■□□□ 1.84
UFD1-201ENST00000263202 CCDC144CPQ8IYA2 1237 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms