RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 VSTM4Q8IW00 320 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
COPB1-201ENST00000249923 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
COPB1-201ENST00000249923 ZSWIM4Q9H7M6 989 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 CASP1P29466 404 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 PPARAQ07869 468 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 MPHOSPH8Q99549 860 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
COPB1-201ENST00000249923 BAZ2BQ9UIF8 2168 aaKnown RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 POLR2DO15514 142 aaKnown RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 PRDM1O75626 825 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 TDO2P48775 406 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 UBASH3AP57075 661 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 RTN1Q16799 776 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 REXO1L1PQ8IX06 675 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 ZNF654Q8IZM8 581 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 CCDC150Q8NCX0 1101 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 UTP14AQ9BVJ6 771 aaKnown RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 ST7Q9NRC1 585 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 EXOC5O00471 708 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 VEGFAP15692 232 aaPredicted RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 KCNJ6P48051 423 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 TBX2Q13207 712 aaPredicted RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 WTAPQ15007 396 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 ENAHQ8N8S7 591 aaPredicted RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 MARCH10Q8NA82 808 aaPredicted RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 FANCBQ8NB91 859 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 KIF18AQ8NI77 898 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 SPATA20Q8TB22 786 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 AK7Q96M32 723 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 DDX41Q9UJV9 622 aaKnown RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 RTL9Q8NET4 1388 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
COPB1-201ENST00000249923 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 KRT23Q9C075 422 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 CSRNP2Q9H175 543 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 CNNM2Q9H8M5 875 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 TNKSO95271 1327 aa11.61□□□□□ -0.55
COPB1-201ENST00000249923 KDM4FA0A1W2PPD8 638 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 MORC3Q14149 939 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 PDILTQ8N807 584 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 FOXP1Q9H334 677 aaPredicted RBP11.6□□□□□ -0.55
COPB1-201ENST00000249923 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 KCNQ4P56696 695 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 SIK1P57059 783 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 POSTNQ15063 836 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 EPSTI1Q96J88 318 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 FAM53CQ9NYF3 392 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 VPS54Q9P1Q0 977 aa11.6□□□□□ -0.55
COPB1-201ENST00000249923 NIP7Q9Y221 180 aaKnown RBP eCLIP11.6□□□□□ -0.55
COPB1-201ENST00000249923 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
COPB1-201ENST00000249923 JMYQ8N9B5 988 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 NUP133Q8WUM0 1156 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 CABP5Q9NP86 173 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 SAMSN1Q9NSI8 373 aaKnown RBP11.59□□□□□ -0.55
COPB1-201ENST00000249923 KIAA1551Q9HCM1 1747 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 VWA3AA6NCI4 1184 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 KCNQ2O43526 872 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 NMT2O60551 498 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 TRIM29Q14134 588 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 ERCC6LQ2NKX8 1250 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 CFAP100Q494V2 611 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
COPB1-201ENST00000249923 CERS3Q8IU89 383 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 TNFRSF25Q93038 417 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 A0A0U1RQJ8 604 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 NRDCO43847 1150 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 CYP7A1P22680 504 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 TC2NQ8N9U0 490 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 MNS1Q8NEH6 495 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 ATRIPQ8WXE1 791 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 LRP2BPQ9P2M1 347 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
COPB1-201ENST00000249923 SRPRBQ9Y5M8 271 aaKnown RBP11.59□□□□□ -0.55
COPB1-201ENST00000249923 A0A0G2JS52 829 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 DEXIO95424 95 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 SERPINC1P01008 464 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 DPYDQ12882 1025 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 ERO1AQ96HE7 468 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 TROAPQ12815 778 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 ERFEQ4G0M1 354 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 CCDC152Q4G0S7 254 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 TOGARAM2Q6ZUX3 1019 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 ELOA2Q8IYF1 753 aaPredicted RBP11.58□□□□□ -0.56
COPB1-201ENST00000249923 PHF20Q9BVI0 1012 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 ABCF2Q9UG63 623 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 NFE2L3Q9Y4A8 694 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 SLU7O95391 586 aaKnown RBP11.58□□□□□ -0.56
COPB1-201ENST00000249923 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 PTF1AQ7RTS3 328 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 LAMB1P07942 1786 aa11.58□□□□□ -0.56
COPB1-201ENST00000249923 SPATA31A1Q5TZJ5 1347 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms