RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 FAM47AQ5JRC9 791 aa22.57■■□□□ 1.2
SBDS-201ENST00000246868 METTL16Q86W50 562 aaKnown RBP22.57■■□□□ 1.2
SBDS-201ENST00000246868 WDR90Q96KV7 1748 aa22.57■■□□□ 1.2
SBDS-201ENST00000246868 TMTC2Q8N394 836 aa22.56■■□□□ 1.2
SBDS-201ENST00000246868 NKX2-3Q8TAU0 364 aa22.56■■□□□ 1.2
SBDS-201ENST00000246868 DCPSQ96C86 337 aaKnown RBP22.56■■□□□ 1.2
SBDS-201ENST00000246868 ZSCAN10Q96SZ4 725 aaPredicted RBP22.56■■□□□ 1.2
SBDS-201ENST00000246868 SH2B1Q9NRF2 756 aaPredicted RBP22.56■■□□□ 1.2
SBDS-201ENST00000246868 PPP2R3BQ9Y5P8 575 aa22.56■■□□□ 1.2
SBDS-201ENST00000246868 SIPA1L1O43166 1804 aa22.56■■□□□ 1.2
SBDS-201ENST00000246868 SH2B2O14492 632 aaPredicted RBP22.55■■□□□ 1.2
SBDS-201ENST00000246868 HSP90AA1P07900 732 aaKnown RBP22.55■■□□□ 1.2
SBDS-201ENST00000246868 WTAPQ15007 396 aa22.55■■□□□ 1.2
SBDS-201ENST00000246868 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
SBDS-201ENST00000246868 IGDCC4Q8TDY8 1250 aa22.55■■□□□ 1.2
SBDS-201ENST00000246868 HOOK2Q96ED9 719 aa22.55■■□□□ 1.2
SBDS-201ENST00000246868 TMX3Q96JJ7 454 aa22.55■■□□□ 1.2
SBDS-201ENST00000246868 CCDC17Q96LX7 622 aa22.55■■□□□ 1.2
SBDS-201ENST00000246868 ZKSCAN3Q9BRR0 538 aa22.55■■□□□ 1.2
SBDS-201ENST00000246868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.55■■□□□ 1.2
SBDS-201ENST00000246868 TNKSO95271 1327 aa22.54■■□□□ 1.2
SBDS-201ENST00000246868 SHMT1P34896 483 aa22.54■■□□□ 1.2
SBDS-201ENST00000246868 LIFRP42702 1097 aa22.54■■□□□ 1.2
SBDS-201ENST00000246868 NFXL1Q6ZNB6 911 aa22.54■■□□□ 1.2
SBDS-201ENST00000246868 ZC3H15Q8WU90 426 aaKnown RBP22.54■■□□□ 1.2
SBDS-201ENST00000246868 LARP6Q9BRS8 491 aaKnown RBP22.54■■□□□ 1.2
SBDS-201ENST00000246868 TAF1DQ9H5J8 278 aaPredicted RBP22.54■■□□□ 1.2
SBDS-201ENST00000246868 SCAF8Q9UPN6 1271 aaKnown RBP22.54■■□□□ 1.2
SBDS-201ENST00000246868 TBC1D12O60347 775 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 NEDD1Q8NHV4 660 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 DNAJC18Q9H819 358 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 TPCN1Q9ULQ1 816 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 NAP1L2Q9ULW6 460 aaPredicted RBP22.53■■□□□ 1.2
SBDS-201ENST00000246868 APOBRQ0VD83 1088 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 CERKLQ49MI3 558 aaPredicted RBP22.53■■□□□ 1.2
SBDS-201ENST00000246868 SULF1Q8IWU6 871 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 LY9Q9HBG7 655 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 GPHNQ9NQX3 736 aaPredicted RBP22.53■■□□□ 1.2
SBDS-201ENST00000246868 TCP11L1Q9NUJ3 509 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 PGAP2Q9UHJ9 254 aa22.53■■□□□ 1.2
SBDS-201ENST00000246868 CCDC69A6NI79 296 aa22.52■■□□□ 1.2
SBDS-201ENST00000246868 FAM196BA6NMK8 535 aa22.52■■□□□ 1.2
SBDS-201ENST00000246868 SLC4A3P48751 1232 aa22.52■■□□□ 1.2
SBDS-201ENST00000246868 EAPPQ56P03 285 aaPredicted RBP22.52■■□□□ 1.2
SBDS-201ENST00000246868 IFIT1BQ5T764 474 aaKnown RBP22.52■■□□□ 1.2
SBDS-201ENST00000246868 TATDN1Q6P1N9 297 aa22.52■■□□□ 1.2
SBDS-201ENST00000246868 ENAHQ8N8S7 591 aaPredicted RBP22.52■■□□□ 1.2
SBDS-201ENST00000246868 TEPSINQ96N21 525 aa22.52■■□□□ 1.2
SBDS-201ENST00000246868 POLR2AP24928 1970 aaKnown RBP22.52■■□□□ 1.19
SBDS-201ENST00000246868 KLF18A0A0U1RQI7 1052 aa22.51■■□□□ 1.19
SBDS-201ENST00000246868 EVCP57679 992 aa22.51■■□□□ 1.19
SBDS-201ENST00000246868 PPP4R3BQ5MIZ7 849 aa22.51■■□□□ 1.19
SBDS-201ENST00000246868 SYNE3Q6ZMZ3 975 aa22.51■■□□□ 1.19
SBDS-201ENST00000246868 SGMS1Q86VZ5 419 aa22.51■■□□□ 1.19
SBDS-201ENST00000246868 ZNF274Q96GC6 653 aaPredicted RBP22.51■■□□□ 1.19
SBDS-201ENST00000246868 PLIN4Q96Q06 1357 aa22.51■■□□□ 1.19
SBDS-201ENST00000246868 MPHOSPH10O00566 681 aaKnown RBP22.5■■□□□ 1.19
SBDS-201ENST00000246868 AKR1B1P15121 316 aa22.5■■□□□ 1.19
SBDS-201ENST00000246868 VEGFAP15692 232 aaPredicted RBP22.5■■□□□ 1.19
SBDS-201ENST00000246868 SEC23AQ15436 765 aa22.5■■□□□ 1.19
SBDS-201ENST00000246868 DCAF15Q66K64 600 aa22.5■■□□□ 1.19
SBDS-201ENST00000246868 CDAN1Q8IWY9 1227 aa22.5■■□□□ 1.19
SBDS-201ENST00000246868 SLKQ9H2G2 1235 aaPredicted RBP22.5■■□□□ 1.19
SBDS-201ENST00000246868 SLC12A7Q9Y666 1083 aa22.5■■□□□ 1.19
SBDS-201ENST00000246868 POTECB2RU33 542 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 NMT2O60551 498 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 ME3Q16798 604 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 MIGA2Q7L4E1 593 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 DGKHQ86XP1 1220 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 CHMP4CQ96CF2 233 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 SLURP2P0DP57 97 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 SUPT20HL1Q3ZLR7 823 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 KRT26Q7Z3Y9 468 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 CABP5Q9NP86 173 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 IL17RBQ9NRM6 502 aa22.49■■□□□ 1.19
SBDS-201ENST00000246868 GOLGA8BA8MQT2 603 aa22.48■■□□□ 1.19
SBDS-201ENST00000246868 MAP3K10Q02779 954 aa22.48■■□□□ 1.19
SBDS-201ENST00000246868 STK3Q13188 491 aa22.48■■□□□ 1.19
SBDS-201ENST00000246868 ABCB5Q2M3G0 1257 aa22.48■■□□□ 1.19
SBDS-201ENST00000246868 NBPF12Q5TAG4 269 aaPredicted RBP22.48■■□□□ 1.19
SBDS-201ENST00000246868 BRPF3Q9ULD4 1205 aa22.48■■□□□ 1.19
SBDS-201ENST00000246868 STX8Q9UNK0 236 aa22.48■■□□□ 1.19
SBDS-201ENST00000246868 ZBTB43O43298 467 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 LARGE1O95461 756 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 PDIA3P30101 505 aaKnown RBP22.47■■□□□ 1.19
SBDS-201ENST00000246868 CUL4AQ13619 759 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 APOA5Q6Q788 366 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 TMEM179Q6ZVK1 233 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 CATIPQ7Z7H3 387 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 KAT14Q9H8E8 782 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 RRAGCQ9HB90 399 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 SENP2Q9HC62 589 aa22.47■■□□□ 1.19
SBDS-201ENST00000246868 PFKFB2O60825 505 aa22.46■■□□□ 1.19
SBDS-201ENST00000246868 ANKS1AQ92625 1134 aa22.46■■□□□ 1.19
SBDS-201ENST00000246868 CEP95Q96GE4 821 aa22.46■■□□□ 1.19
SBDS-201ENST00000246868 CLEC11AQ9Y240 323 aa22.46■■□□□ 1.19
SBDS-201ENST00000246868 RCAN1P53805 252 aa22.46■■□□□ 1.19
SBDS-201ENST00000246868 CCDC83Q8IWF9 413 aa22.46■■□□□ 1.19
SBDS-201ENST00000246868 ZNF654Q8IZM8 581 aa22.46■■□□□ 1.19
SBDS-201ENST00000246868 SPRYD3Q8NCJ5 442 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms