RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PPP2R2CQ9Y2T4 447 aa22.16■■□□□ 1.14
SOX4-201ENST00000244745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.15■■□□□ 1.14
SOX4-201ENST00000244745 DYMQ7RTS9 669 aa22.15■■□□□ 1.14
SOX4-201ENST00000244745 CEP83Q9Y592 693 aa22.15■■□□□ 1.14
SOX4-201ENST00000244745 VIMP08670 466 aaKnown RBP22.15■■□□□ 1.14
SOX4-201ENST00000244745 TEX11Q8IYF3 940 aa22.15■■□□□ 1.14
SOX4-201ENST00000244745 FRMD4BQ9Y2L6 1034 aa22.15■■□□□ 1.14
SOX4-201ENST00000244745 VWA3BQ502W6 1294 aa22.15■■□□□ 1.14
SOX4-201ENST00000244745 GIGYF1O75420 1035 aaPredicted RBP22.14■■□□□ 1.14
SOX4-201ENST00000244745 HSPD1P10809 573 aaKnown RBP22.14■■□□□ 1.14
SOX4-201ENST00000244745 ARHGAP25P42331 645 aa22.14■■□□□ 1.14
SOX4-201ENST00000244745 TSNARE1Q96NA8 513 aa22.14■■□□□ 1.14
SOX4-201ENST00000244745 HAUS7Q99871 368 aa22.14■■□□□ 1.14
SOX4-201ENST00000244745 MTUS1Q9ULD2 1270 aa22.14■■□□□ 1.14
SOX4-201ENST00000244745 ATP2A1O14983 1001 aa22.14■■□□□ 1.14
SOX4-201ENST00000244745 HIBADHP31937 336 aaKnown RBP22.14■■□□□ 1.14
SOX4-201ENST00000244745 MRFAP1L1Q96HT8 127 aa22.14■■□□□ 1.14
SOX4-201ENST00000244745 UGGT1Q9NYU2 1555 aa22.14■■□□□ 1.14
SOX4-201ENST00000244745 CALCOCO2Q13137 446 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 ORAI2Q96SN7 254 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 NAP1L4Q99733 375 aaKnown RBP22.14■■□□□ 1.13
SOX4-201ENST00000244745 TBC1D7Q9P0N9 293 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 BRD3Q15059 726 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 ZMYM6O95789 1325 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 ATP11AP98196 1134 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
SOX4-201ENST00000244745 GDAP1L1Q96MZ0 367 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 CLIC6Q96NY7 704 aa22.14■■□□□ 1.13
SOX4-201ENST00000244745 ZBTB16Q05516 673 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 SETDB1Q15047 1291 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 KLHL7Q8IXQ5 586 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 CPSF2Q9P2I0 782 aaKnown RBP22.13■■□□□ 1.13
SOX4-201ENST00000244745 OSBPL3Q9H4L5 887 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 SH3TC1Q8TE82 1336 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 CABP7Q86V35 215 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 FERMT1Q9BQL6 677 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 TLR7Q9NYK1 1049 aaKnown RBP22.13■■□□□ 1.13
SOX4-201ENST00000244745 UTP11Q9Y3A2 253 aaKnown RBP22.13■■□□□ 1.13
SOX4-201ENST00000244745 TNFAIP3P21580 790 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 UIMC1Q96RL1 719 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 MAP2K2P36507 400 aa22.13■■□□□ 1.13
SOX4-201ENST00000244745 FAM212AQ96EL1 285 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 PKD2L1Q9P0L9 805 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 SWAP70Q9UH65 585 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 ZNF827Q17R98 1081 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 A6NNZ2 444 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 CHMP2AO43633 222 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 CALUO43852 315 aaPredicted RBP22.12■■□□□ 1.13
SOX4-201ENST00000244745 TUBB8Q3ZCM7 444 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 TYW1BQ6NUM6 668 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 NOSTRINQ8IVI9 506 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 MBD5Q9P267 1494 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 CCDC63Q8NA47 563 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 TRIM31Q9BZY9 425 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 PLEKHA4Q9H4M7 779 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 MROH5Q6ZUA9 1318 aa22.12■■□□□ 1.13
SOX4-201ENST00000244745 CMA1P23946 247 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 CDC25BP30305 580 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 SLC9C1Q4G0N8 1177 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 SND1Q7KZF4 910 aaKnown RBP eCLIP22.11■■□□□ 1.13
SOX4-201ENST00000244745 SIRT2Q8IXJ6 389 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 IMPG2Q9BZV3 1241 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 FANCLQ9NW38 375 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 MAGEA1P43355 309 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 PPARAQ07869 468 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 TFCP2L1Q9NZI6 479 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 RTCBQ9Y3I0 505 aaKnown RBP22.11■■□□□ 1.13
SOX4-201ENST00000244745 KCNJ18B7U540 433 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 KRT5P13647 590 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 KCNJ12Q14500 433 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 DPH6Q7L8W6 267 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 PPP1R13BQ96KQ4 1090 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 EFCAB8A8MWE9 144 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 PDIA3P30101 505 aaKnown RBP22.11■■□□□ 1.13
SOX4-201ENST00000244745 INTS8Q75QN2 995 aaKnown RBP22.11■■□□□ 1.13
SOX4-201ENST00000244745 SNX29Q8TEQ0 813 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 MAP4K1Q92918 833 aa22.11■■□□□ 1.13
SOX4-201ENST00000244745 PLEKHG3A1L390 1219 aa22.1■■□□□ 1.13
SOX4-201ENST00000244745 ADD1P35611 737 aaKnown RBP22.1■■□□□ 1.13
SOX4-201ENST00000244745 MORC3Q14149 939 aa22.1■■□□□ 1.13
SOX4-201ENST00000244745 NONOQ15233 471 aaKnown RBP eCLIP22.1■■□□□ 1.13
SOX4-201ENST00000244745 LRWD1Q9UFC0 647 aa22.1■■□□□ 1.13
SOX4-201ENST00000244745 MRPL12P52815 198 aaKnown RBP22.1■■□□□ 1.13
SOX4-201ENST00000244745 NBPF14Q5TI25 921 aa22.1■■□□□ 1.13
SOX4-201ENST00000244745 GOLGA5Q8TBA6 731 aa22.1■■□□□ 1.13
SOX4-201ENST00000244745 SARNPP82979 210 aaKnown RBP22.1■■□□□ 1.13
SOX4-201ENST00000244745 TRIM7Q9C029 511 aa22.1■■□□□ 1.13
SOX4-201ENST00000244745 ZNF654Q8IZM8 581 aa22.09■■□□□ 1.13
SOX4-201ENST00000244745 IFT74Q96LB3 600 aa22.09■■□□□ 1.13
SOX4-201ENST00000244745 SMC6Q96SB8 1091 aa22.09■■□□□ 1.13
SOX4-201ENST00000244745 NAP1L3Q99457 506 aaPredicted RBP22.09■■□□□ 1.13
SOX4-201ENST00000244745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.09■■□□□ 1.13
SOX4-201ENST00000244745 CEP104O60308 925 aa22.09■■□□□ 1.13
SOX4-201ENST00000244745 PARP10Q53GL7 1025 aa22.09■■□□□ 1.13
SOX4-201ENST00000244745 TDRD7Q8NHU6 1098 aaKnown RBP22.09■■□□□ 1.13
SOX4-201ENST00000244745 SPOPO43791 374 aa22.09■■□□□ 1.13
SOX4-201ENST00000244745 C11orf57Q6ZUT1 292 aaPredicted RBP22.09■■□□□ 1.13
SOX4-201ENST00000244745 CUL4AQ13619 759 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms