RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 SMARCC2Q8TAQ2 1214 aa16.45■□□□□ 0.22
PTK7-201ENST00000230418 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
PTK7-201ENST00000230418 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
PTK7-201ENST00000230418 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTK7-201ENST00000230418 LY9Q9HBG7 655 aa16.45■□□□□ 0.22
PTK7-201ENST00000230418 RBM28Q9NW13 759 aaKnown RBP16.45■□□□□ 0.22
PTK7-201ENST00000230418 AFF2P51816 1311 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 CCT6AP40227 531 aaKnown RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 GNAQP50148 359 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 RBM26Q5T8P6 1007 aaKnown RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 KIF18AQ8NI77 898 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 ARID4AP29374 1257 aaPredicted RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 SLC39A14Q15043 492 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 EYA3Q99504 573 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 VEZTQ9HBM0 779 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 GSDMDP57764 484 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 FANCCQ00597 558 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 SNW1Q13573 536 aaKnown RBP16.44■□□□□ 0.22
PTK7-201ENST00000230418 OXER1Q8TDS5 423 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 PCDHA5Q9Y5H7 936 aa16.44■□□□□ 0.22
PTK7-201ENST00000230418 NFIXQ14938 502 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 NFE2L3Q9Y4A8 694 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 CALML3P27482 149 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 RRP36Q96EU6 259 aaKnown RBP16.43■□□□□ 0.22
PTK7-201ENST00000230418 SPATA31A5Q5VU36 1347 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 SPATA31A7Q8IWB4 1347 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 CMA1P23946 247 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 ARID5BQ14865 1188 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 CCDC148Q8NFR7 591 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
PTK7-201ENST00000230418 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
PTK7-201ENST00000230418 SMIM22K7EJ46 135 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 GOLGA8FQ08AF8 430 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 GOLGA8DPQ0D2H9 430 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 ARHGAP29Q52LW3 1261 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 IFNAR1P17181 557 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 ASIC1P78348 528 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 POSTNQ15063 836 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 CCDC12Q8WUD4 166 aaPredicted RBP16.42■□□□□ 0.22
PTK7-201ENST00000230418 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
PTK7-201ENST00000230418 PLCG2P16885 1265 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 CASP1P29466 404 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 NLRP12P59046 1061 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 ZYXQ15942 572 aaKnown RBP16.42■□□□□ 0.22
PTK7-201ENST00000230418 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 DNAI1Q9UI46 699 aa16.42■□□□□ 0.22
PTK7-201ENST00000230418 INF2Q27J81 1249 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 SMYD4Q8IYR2 804 aaPredicted RBP16.41■□□□□ 0.22
PTK7-201ENST00000230418 SH3RF3Q8TEJ3 882 aaPredicted RBP16.41■□□□□ 0.22
PTK7-201ENST00000230418 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
PTK7-201ENST00000230418 PTGDRQ13258 359 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 IQUBQ8NA54 791 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 KCNB2Q92953 911 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 BMP2KQ9NSY1 1161 aaPredicted RBP16.41■□□□□ 0.22
PTK7-201ENST00000230418 USP40Q9NVE5 1235 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 POLR3EQ9NVU0 708 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 XDHP47989 1333 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 TXKP42681 527 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 LIFRP42702 1097 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 MTIF2P46199 727 aaKnown RBP16.41■□□□□ 0.22
PTK7-201ENST00000230418 ENAHQ8N8S7 591 aaPredicted RBP16.41■□□□□ 0.22
PTK7-201ENST00000230418 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 C6orf50Q9HD87 102 aa16.41■□□□□ 0.22
PTK7-201ENST00000230418 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
PTK7-201ENST00000230418 TMEM266Q2M3C6 531 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 CALML4Q96GE6 196 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 DEF6Q9H4E7 631 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 FANCLQ9NW38 375 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 CACNB3P54284 484 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 LONRF3Q496Y0 759 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 VPS16Q9H269 839 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 ZNHIT6Q9NWK9 470 aaKnown RBP16.4■□□□□ 0.22
PTK7-201ENST00000230418 RGPD2P0DJD1 1756 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 GNG11P61952 73 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 CBX1P83916 185 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 KARSQ15046 597 aaKnown RBP16.4■□□□□ 0.22
PTK7-201ENST00000230418 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
PTK7-201ENST00000230418 BIN2Q9UBW5 565 aaPredicted RBP16.4■□□□□ 0.22
PTK7-201ENST00000230418 FAM205CA6NFA0 338 aa16.39■□□□□ 0.21
PTK7-201ENST00000230418 DNA2P51530 1060 aa16.39■□□□□ 0.21
PTK7-201ENST00000230418 FEZ1Q99689 392 aa16.39■□□□□ 0.21
PTK7-201ENST00000230418 ATP8A2Q9NTI2 1148 aa16.39■□□□□ 0.21
PTK7-201ENST00000230418 MMP1P03956 469 aa16.39■□□□□ 0.21
PTK7-201ENST00000230418 SCG2P13521 617 aa16.39■□□□□ 0.21
PTK7-201ENST00000230418 EPSTI1Q96J88 318 aa16.39■□□□□ 0.21
PTK7-201ENST00000230418 DCP1AQ9NPI6 582 aaPredicted RBP16.39■□□□□ 0.21
PTK7-201ENST00000230418 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms