RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TTLL7Q6ZT98 887 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 CCDC77Q9BR77 488 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 CBX8Q9HC52 389 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 ERBB4Q15303 1308 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 RICTORQ6R327 1708 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 FANCCQ00597 558 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 RAPGEF1Q13905 1077 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 GTF3C6Q969F1 213 aa12.92□□□□□ -0.34
NOD1-201ENST00000222823 CCDC97Q96F63 343 aaPredicted RBP12.92□□□□□ -0.34
NOD1-201ENST00000222823 NBPF14Q5TI25 921 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 GLT8D2Q9H1C3 349 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 NFE2L3Q9Y4A8 694 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 EEF2P13639 858 aaKnown RBP12.91□□□□□ -0.34
NOD1-201ENST00000222823 VAV2P52735 878 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 NONOQ15233 471 aaKnown RBP eCLIP12.91□□□□□ -0.34
NOD1-201ENST00000222823 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 KCNJ14Q9UNX9 436 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 OPA1O60313 960 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 GJC1P36383 396 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 SLC1A4P43007 532 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 TFAP4Q01664 338 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 CNNM4Q6P4Q7 775 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
NOD1-201ENST00000222823 MAST3O60307 1309 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
NOD1-201ENST00000222823 RHOXF2BP0C7M4 288 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 GIGYF2Q6Y7W6 1299 aaKnown RBP12.9□□□□□ -0.34
NOD1-201ENST00000222823 RHOXF2Q9BQY4 288 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 HAUS3Q68CZ6 603 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
NOD1-201ENST00000222823 HAUS7Q99871 368 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 PKD2L1Q9P0L9 805 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 ERBB3P21860 1342 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 ATRIPQ8WXE1 791 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 SEC62Q99442 399 aaKnown RBP12.9□□□□□ -0.34
NOD1-201ENST00000222823 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 ANKRD26Q9UPS8 1709 aa12.9□□□□□ -0.34
NOD1-201ENST00000222823 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 USP17L12C9JPN9 530 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 USP17L21D6R901 530 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 CETN3O15182 167 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 CTSWP56202 376 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 KRT25Q7Z3Z0 450 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.35
NOD1-201ENST00000222823 TMEM110-MUSTN1A8MSY1 372 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 NCBP1Q09161 790 aaKnown RBP12.89□□□□□ -0.35
NOD1-201ENST00000222823 NECTIN1Q15223 517 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 FMNL3Q8IVF7 1028 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 ARHGEF10LQ9HCE6 1279 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 FRMD4BQ9Y2L6 1034 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 SIGLEC1Q9BZZ2 1709 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 SASH1O94885 1247 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 ARID4AP29374 1257 aaPredicted RBP12.89□□□□□ -0.35
NOD1-201ENST00000222823 ZNF274Q96GC6 653 aaPredicted RBP12.89□□□□□ -0.35
NOD1-201ENST00000222823 TLR7Q9NYK1 1049 aaKnown RBP12.89□□□□□ -0.35
NOD1-201ENST00000222823 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
NOD1-201ENST00000222823 ZNF75DP51815 510 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 PPP1R14CQ8TAE6 165 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
NOD1-201ENST00000222823 CEP83Q9Y592 693 aa12.89□□□□□ -0.35
NOD1-201ENST00000222823 STAMBPO95630 424 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 PAK1Q13153 545 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 TRIM14Q14142 442 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 DIP2BQ9P265 1576 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 EPB41P11171 864 aaKnown RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 HERC4Q5GLZ8 1057 aaPredicted RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 ZNF654Q8IZM8 581 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 SNX29Q8TEQ0 813 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 CHMP2AO43633 222 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 NLRP12P59046 1061 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 GSTA5Q7RTV2 222 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 IFT81Q8WYA0 676 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 IQCGQ9H095 443 aaKnown RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 ZHX1Q9UKY1 873 aaPredicted RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
NOD1-201ENST00000222823 PDE6AP16499 860 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 KRT9P35527 623 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 TNNC1P63316 161 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 POSTNQ15063 836 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
NOD1-201ENST00000222823 STAMQ92783 540 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms