RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 STAG1Q8WVM7 1258 aa7.68□□□□□ -1.18
CNIH1-201ENST00000216416 ZSCAN10Q96SZ4 725 aaPredicted RBP7.68□□□□□ -1.18
CNIH1-201ENST00000216416 RFX7Q2KHR2 1363 aa7.68□□□□□ -1.18
CNIH1-201ENST00000216416 TNS1Q9HBL0 1735 aaKnown RBP7.68□□□□□ -1.18
CNIH1-201ENST00000216416 GOLGA6L22H0YM25 854 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 SLC16A2P36021 539 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 IARSP41252 1262 aaKnown RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 CDK8P49336 464 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 JAG1P78504 1218 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 SPTY2D1Q68D10 685 aaPredicted RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 ISM2Q6H9L7 571 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 CEP95Q96GE4 821 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 MKRN1Q9UHC7 482 aaKnown RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 WNT7AO00755 349 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 CXCL9Q07325 125 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 TBC1D10BQ4KMP7 808 aaPredicted RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 EARS2Q5JPH6 523 aaKnown RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 FANCBQ8NB91 859 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 IL17RAQ96F46 866 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 AGXT2Q9BYV1 514 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 GPR75-ASB3A0A0A6YYF3 556 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 PLCB2Q00722 1185 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 NTRK3Q16288 839 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 RTN1Q16799 776 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 CFAP100Q494V2 611 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 IQCA1Q86XH1 822 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 TEKT1Q969V4 418 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 NUP88Q99567 741 aaPredicted RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 TMEM39BQ9GZU3 492 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 PIM2Q9P1W9 311 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 NFKBIEO00221 500 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 SEMA3EO15041 775 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 EPB41L2O43491 1005 aaKnown RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 GNAT2P19087 354 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 POLD1P28340 1107 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 GNL2Q13823 731 aaKnown RBP7.67□□□□□ -1.18
CNIH1-201ENST00000216416 EYA3Q99504 573 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 CLIC4Q9Y696 253 aa7.67□□□□□ -1.18
CNIH1-201ENST00000216416 DUOX1Q9NRD9 1551 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 RASA1P20936 1047 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SEC23AQ15436 765 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SYNE3Q6ZMZ3 975 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SH3BP5LQ7L8J4 393 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 ZFP91Q96JP5 570 aaPredicted RBP7.66□□□□□ -1.18
CNIH1-201ENST00000216416 HTTP42858 3142 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 COL4A5P29400 1685 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 KIAA2012Q0VF49 1180 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 ALX1Q15699 326 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SLC35G1Q2M3R5 365 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 KRT40Q6A162 431 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 ARHGAP27Q6ZUM4 889 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SRBD1Q8N5C6 995 aaKnown RBP7.66□□□□□ -1.18
CNIH1-201ENST00000216416 ZNF274Q96GC6 653 aaPredicted RBP7.66□□□□□ -1.18
CNIH1-201ENST00000216416 KRT23Q9C075 422 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 FHDC1Q9C0D6 1143 aaPredicted RBP7.66□□□□□ -1.18
CNIH1-201ENST00000216416 DNAJC18Q9H819 358 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 GPCPD1Q9NPB8 672 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 ATP8A2Q9NTI2 1148 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 CLIP2Q9UDT6 1046 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 DDX11L8A8MPP1 907 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 GRIN1Q05586 938 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 TROAPQ12815 778 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 RRP1BQ14684 758 aaKnown RBP7.66□□□□□ -1.18
CNIH1-201ENST00000216416 TTBK2Q6IQ55 1244 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 PODNQ7Z5L7 613 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 PNMA1Q8ND90 353 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 PGBD1Q96JS3 809 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 PDE4BQ07343 736 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SART3Q15020 963 aaKnown RBP7.66□□□□□ -1.18
CNIH1-201ENST00000216416 CRACR2BQ8N4Y2 399 aaPredicted RBP7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SMARCC2Q8TAQ2 1214 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SPATA32Q96LK8 384 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 CLIC6Q96NY7 704 aa7.66□□□□□ -1.18
CNIH1-201ENST00000216416 SMCHD1A6NHR9 2005 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 ECM2O94769 699 aaPredicted RBP7.65□□□□□ -1.18
CNIH1-201ENST00000216416 LDHCP07864 332 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 CDC25AP30304 524 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 DALRD3Q5D0E6 543 aaKnown RBP7.65□□□□□ -1.18
CNIH1-201ENST00000216416 KCTD1Q719H9 257 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 BICD2Q8TD16 824 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 MTFR1LQ9H019 292 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 FAM198AQ9UFP1 575 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 A0A1B0GVL5 298 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 CCDC93Q567U6 631 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 TYW1BQ6NUM6 668 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 TMEM47Q9BQJ4 181 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 A0A1B0GUL6 1792 aa7.65□□□□□ -1.18
CNIH1-201ENST00000216416 ZNF831Q5JPB2 1677 aa7.65□□□□□ -1.19
CNIH1-201ENST00000216416 PTGER2P43116 358 aa7.65□□□□□ -1.19
CNIH1-201ENST00000216416 ME1P48163 572 aa7.65□□□□□ -1.19
CNIH1-201ENST00000216416 RESTQ13127 1097 aa7.65□□□□□ -1.19
CNIH1-201ENST00000216416 STYK1Q6J9G0 422 aa7.65□□□□□ -1.19
CNIH1-201ENST00000216416 FBXO18Q8NFZ0 1043 aa7.65□□□□□ -1.19
CNIH1-201ENST00000216416 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.65□□□□□ -1.19
CNIH1-201ENST00000216416 RNF41Q9H4P4 317 aaPredicted RBP7.65□□□□□ -1.19
CNIH1-201ENST00000216416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.65□□□□□ -1.19
CNIH1-201ENST00000216416 USP17L5A8MUK1 530 aa7.64□□□□□ -1.19
CNIH1-201ENST00000216416 RGL2O15211 777 aa7.64□□□□□ -1.19
CNIH1-201ENST00000216416 ZSCAN23Q3MJ62 389 aa7.64□□□□□ -1.19
CNIH1-201ENST00000216416 GOLGA6L4A6NEF3 574 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms