RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 TAOK3Q9H2K8 898 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 AATFQ9NY61 560 aaKnown RBP eCLIP4.8□□□□□ -1.64
CFTR-201ENST00000003084 DIP2AQ14689 1571 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 INO80Q9ULG1 1556 aaPredicted RBP4.8□□□□□ -1.64
CFTR-201ENST00000003084 CEP152O94986 1710 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 PLEKHG2Q9H7P9 1386 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 HEG1Q9ULI3 1381 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 PTPDC1A2A3K4 754 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 SPTLC2O15270 562 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 TAF5LO75529 589 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 NEFHP12036 1026 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 NLRX1Q86UT6 975 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 RTKN2Q8IZC4 609 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 GPAMQ9HCL2 828 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 USP25Q9UHP3 1055 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 SSH2Q76I76 1423 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 TRIM37O94972 964 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 SERPINB2P05120 415 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 NPR1P16066 1061 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 DNAJB2P25686 324 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 ASIC1P78348 528 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 TDRD12Q587J7 1177 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 BEND3Q5T5X7 828 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 SV2BQ7L1I2 683 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 ZNF771Q7L3S4 317 aaPredicted RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 CCDC65Q8IXS2 484 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 NECAB1Q8N987 351 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 USP26Q9BXU7 913 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 GPCPD1Q9NPB8 672 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 ZNF532Q9HCE3 1301 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 FIGNL2A6NMB9 653 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 PHF20L1A8MW92 1017 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 FMNL1O95466 1100 aaPredicted RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 ALDH1A1P00352 501 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 RPL13P26373 211 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 SMTNP53814 917 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 AK2P54819 239 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 RBM6P78332 1123 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 IRX3P78415 501 aaPredicted RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 MAP9Q49MG5 647 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 TMEM259Q4ZIN3 620 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 RILPL1Q5EBL4 403 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CERKQ8TCT0 537 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 NAA15Q9BXJ9 866 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 GPHNQ9NQX3 736 aaPredicted RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 FRMPD1Q5SYB0 1578 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 MED14O60244 1454 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 PPARAQ07869 468 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CCDC93Q567U6 631 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 MSL1Q68DK7 614 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 MCF2L2Q86YR7 1114 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 TTF2Q9UNY4 1162 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 ZNF804BA4D1E1 1349 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 PRR36Q9H6K5 1346 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 NCOA3Q9Y6Q9 1424 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CALUO43852 315 aaPredicted RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 RLBP1P12271 317 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 USP14P54578 494 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 TIMM10P62072 90 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CHRNDQ07001 517 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 POTEHQ6S545 545 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CLEC4GQ6UXB4 293 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 GIGYF2Q6Y7W6 1299 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 TICAM2Q86XR7 235 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 KCTD17Q8N5Z5 321 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 PLVAPQ9BX97 442 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 LRRC2Q9BYS8 371 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 ANGEL1Q9UNK9 670 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 PCDHB11Q9Y5F2 797 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 USP31Q70CQ4 1352 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 PALLDQ8WX93 1383 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CRB1P82279 1406 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 BACH1O14867 736 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 EZRP15311 586 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 OSBPP22059 807 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 EAPPQ56P03 285 aaPredicted RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 DALRD3Q5D0E6 543 aaKnown RBP4.79□□□□□ -1.64
CFTR-201ENST00000003084 MFSD14BQ5SR56 506 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 HS2ST1Q7LGA3 356 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CCDC91Q7Z6B0 441 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 FILIP1Q7Z7B0 1213 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 TGFBRAP1Q8WUH2 860 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 LMBR1Q8WVP7 490 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 CCDC102AQ96A19 550 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 IFT74Q96LB3 600 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 JAG2Q9Y219 1238 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 AFF2P51816 1311 aa4.79□□□□□ -1.64
CFTR-201ENST00000003084 MCM7P33993 719 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 SLC1A4P43007 532 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 PAFAH1B1P43034 410 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 ZAP70P43403 619 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 GTF2IP78347 998 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 GALNT17Q6IS24 598 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 HOOK3Q86VS8 718 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 IQUBQ8NA54 791 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 ARMC2Q8NEN0 867 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 SSH3Q8TE77 659 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 TFIP11Q9UBB9 837 aaKnown RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 MADDQ8WXG6 1647 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 QRICH2Q9H0J4 1663 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms