RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Gm2310J3QNJ2 377 aa3.1□□□□□ -1.91
Clk1-201ENSMUST00000034868 Defb9Q8R2I6 67 aa3.1□□□□□ -1.91
Clk1-201ENSMUST00000034868 SpenQ62504 3644 aaKnown RBP3.09□□□□□ -1.91
Clk1-201ENSMUST00000034868 Col6a6Q8C6K9 2265 aa3.09□□□□□ -1.91
Clk1-201ENSMUST00000034868 Igkv4-58A0A0G2JGI6 119 aa3.09□□□□□ -1.91
Clk1-201ENSMUST00000034868 Igkv3-9A0A140T8P4 119 aa3.09□□□□□ -1.91
Clk1-201ENSMUST00000034868 Sprr2jO70561 109 aa3.09□□□□□ -1.91
Clk1-201ENSMUST00000034868 Cox7bP56393 80 aa3.09□□□□□ -1.91
Clk1-201ENSMUST00000034868 A330070K13RikQ8CA53 115 aa3.09□□□□□ -1.91
Clk1-201ENSMUST00000034868 Nbeal2Q6ZQA0 2742 aa3.09□□□□□ -1.92
Clk1-201ENSMUST00000034868 OtoglF7A4A7 2325 aa3.08□□□□□ -1.92
Clk1-201ENSMUST00000034868 Lynx1P0DP60 116 aa3.08□□□□□ -1.92
Clk1-201ENSMUST00000034868 Sprr1bQ62267 153 aa3.08□□□□□ -1.92
Clk1-201ENSMUST00000034868 Camk2n1Q6QWF9 78 aa3.08□□□□□ -1.92
Clk1-201ENSMUST00000034868 Celsr2Q9R0M0 2920 aa3.08□□□□□ -1.92
Clk1-201ENSMUST00000034868 Wfdc13Q5DQQ6 81 aa3.07□□□□□ -1.92
Clk1-201ENSMUST00000034868 Wfdc15aQ8BH89 80 aa3.07□□□□□ -1.92
Clk1-201ENSMUST00000034868 Spink6Q8BT20 105 aa3.07□□□□□ -1.92
Clk1-201ENSMUST00000034868 Spint3Q3UW09 88 aa3.07□□□□□ -1.92
Clk1-201ENSMUST00000034868 AY074887Q8R5F9 132 aa3.07□□□□□ -1.92
Clk1-201ENSMUST00000034868 Msrb1Q9JLC3 116 aa3.07□□□□□ -1.92
Clk1-201ENSMUST00000034868 Abca13Q5SSE9 5034 aa3.06□□□□□ -1.92
Clk1-201ENSMUST00000034868 Spink1P09036 80 aa3.06□□□□□ -1.92
Clk1-201ENSMUST00000034868 OtogO55225 2910 aa3.06□□□□□ -1.92
Clk1-201ENSMUST00000034868 Sfta2E9PXB6 77 aa3.05□□□□□ -1.92
Clk1-201ENSMUST00000034868 Gm10772F7AIG4 85 aa3.05□□□□□ -1.92
Clk1-201ENSMUST00000034868 Itpr2Q9Z329 2701 aa3.05□□□□□ -1.92
Clk1-201ENSMUST00000034868 Muc4Q8JZM8 3443 aa3.05□□□□□ -1.92
Clk1-201ENSMUST00000034868 3110018I06RikQ9CXS0 120 aa3.05□□□□□ -1.92
Clk1-201ENSMUST00000034868 Lelp1Q9DAE3 120 aa3.05□□□□□ -1.92
Clk1-201ENSMUST00000034868 Chchd7Q8K2Q5 85 aa3.04□□□□□ -1.92
Clk1-201ENSMUST00000034868 Igkv3-2A0A075B5P0 119 aa3.03□□□□□ -1.92
Clk1-201ENSMUST00000034868 Psors1c2Q80ZC9 134 aa3.03□□□□□ -1.92
Clk1-201ENSMUST00000034868 B930094E09RikQ8C4T2 136 aa3.03□□□□□ -1.92
Clk1-201ENSMUST00000034868 Notch1Q01705 2531 aa3.03□□□□□ -1.92
Clk1-201ENSMUST00000034868 Ryr3A2AGL3 4863 aa3.03□□□□□ -1.92
Clk1-201ENSMUST00000034868 Igkv4-72A0A0B4J1I4 117 aa3.02□□□□□ -1.93
Clk1-201ENSMUST00000034868 C130032M10RikQ8C888 123 aa3.02□□□□□ -1.93
Clk1-201ENSMUST00000034868 Vps13cQ8BX70 3748 aa3.02□□□□□ -1.93
Clk1-201ENSMUST00000034868 Prp2P05143 317 aa3.02□□□□□ -1.93
Clk1-201ENSMUST00000034868 Notch3Q61982 2318 aa3.01□□□□□ -1.93
Clk1-201ENSMUST00000034868 Ryr2E9Q401 4966 aaKnown RBP3.01□□□□□ -1.93
Clk1-201ENSMUST00000034868 Usmg5Q78IK2 58 aa3.01□□□□□ -1.93
Clk1-201ENSMUST00000034868 Mrpl34Q99N91 92 aa3.01□□□□□ -1.93
Clk1-201ENSMUST00000034868 Stab1Q8R4Y4 2571 aa3□□□□□ -1.93
Clk1-201ENSMUST00000034868 Gm5965D3Z724 196 aa3□□□□□ -1.93
Clk1-201ENSMUST00000034868 1600014C23RikQ9DAX4 101 aa3□□□□□ -1.93
Clk1-201ENSMUST00000034868 Krtap13O88375 197 aa2.99□□□□□ -1.93
Clk1-201ENSMUST00000034868 Cox6a2P43023 97 aa2.99□□□□□ -1.93
Clk1-201ENSMUST00000034868 PscaP57096 123 aa2.99□□□□□ -1.93
Clk1-201ENSMUST00000034868 Cmya5Q70KF4 3739 aa2.99□□□□□ -1.93
Clk1-201ENSMUST00000034868 2310061N02RikQ9D6S9 174 aa2.97□□□□□ -1.93
Clk1-201ENSMUST00000034868 Tenm1Q9WTS4 2731 aa2.97□□□□□ -1.93
Clk1-201ENSMUST00000034868 Defb37Q7TMD2 62 aa2.97□□□□□ -1.93
Clk1-201ENSMUST00000034868 2010109I03RikQ9CQ11 111 aa2.97□□□□□ -1.93
Clk1-201ENSMUST00000034868 Prol1E9PYQ4 312 aa2.96□□□□□ -1.94
Clk1-201ENSMUST00000034868 Muc6Q80T03 2850 aa2.96□□□□□ -1.94
Clk1-201ENSMUST00000034868 Gm10065F6TJM2 114 aa2.95□□□□□ -1.94
Clk1-201ENSMUST00000034868 Dnah8Q91XQ0 4731 aa2.95□□□□□ -1.94
Clk1-201ENSMUST00000034868 Zcchc13Q9D548 170 aa2.95□□□□□ -1.94
Clk1-201ENSMUST00000034868 Wfdc12Q9JHY3 85 aa2.95□□□□□ -1.94
Clk1-201ENSMUST00000034868 Krtap14O08640 167 aa2.94□□□□□ -1.94
Clk1-201ENSMUST00000034868 Defb42Q8BVB5 75 aa2.93□□□□□ -1.94
Clk1-201ENSMUST00000034868 Lama5Q61001 3718 aa2.93□□□□□ -1.94
Clk1-201ENSMUST00000034868 Tomm7Q9D173 55 aa2.92□□□□□ -1.94
Clk1-201ENSMUST00000034868 Csmd2V9GX34 3611 aa2.92□□□□□ -1.94
Clk1-201ENSMUST00000034868 Wfdc17Q5SSJ1 76 aa2.91□□□□□ -1.94
Clk1-201ENSMUST00000034868 Defb40Q70KL2 73 aa2.91□□□□□ -1.94
Clk1-201ENSMUST00000034868 Nop10Q9CQS2 64 aa2.91□□□□□ -1.94
Clk1-201ENSMUST00000034868 HydinQ80W93 5154 aa2.9□□□□□ -1.94
Clk1-201ENSMUST00000034868 Rpl37aP61514 92 aa2.9□□□□□ -1.94
Clk1-201ENSMUST00000034868 Defb33Q30KN3 62 aa2.9□□□□□ -1.94
Clk1-201ENSMUST00000034868 Sprr4Q8CGN8 76 aa2.9□□□□□ -1.94
Clk1-201ENSMUST00000034868 Dmac1Q9CQ00 111 aa2.9□□□□□ -1.94
Clk1-201ENSMUST00000034868 Gm9195A0A140LHT4 2805 aa2.9□□□□□ -1.94
Clk1-201ENSMUST00000034868 Birc6O88738 4882 aa2.9□□□□□ -1.95
Clk1-201ENSMUST00000034868 BC067074F6RXI4 2391 aa2.9□□□□□ -1.95
Clk1-201ENSMUST00000034868 PcloQ9QYX7 5068 aa2.89□□□□□ -1.95
Clk1-201ENSMUST00000034868 VwfQ8CIZ8 2813 aa2.89□□□□□ -1.95
Clk1-201ENSMUST00000034868 Gm11596B1AQB0 205 aa2.88□□□□□ -1.95
Clk1-201ENSMUST00000034868 Fam168bQ80XQ8 194 aa2.88□□□□□ -1.95
Clk1-201ENSMUST00000034868 LystP97412 3788 aa2.88□□□□□ -1.95
Clk1-201ENSMUST00000034868 PrlhG3UWC3 86 aa2.87□□□□□ -1.95
Clk1-201ENSMUST00000034868 Anapc11Q9CPX9 84 aa2.87□□□□□ -1.95
Clk1-201ENSMUST00000034868 1700018G05RikA0A1B0GSI2 66 aa2.86□□□□□ -1.95
Clk1-201ENSMUST00000034868 Gm10272F7CZ33 110 aa2.86□□□□□ -1.95
Clk1-201ENSMUST00000034868 Snhg11Q4G0K9 87 aa2.86□□□□□ -1.95
Clk1-201ENSMUST00000034868 Gm10267M0QWD8 85 aa2.85□□□□□ -1.95
Clk1-201ENSMUST00000034868 ApcQ61315 2845 aa2.85□□□□□ -1.95
Clk1-201ENSMUST00000034868 Kmt2cQ8BRH4 4903 aa2.85□□□□□ -1.95
Clk1-201ENSMUST00000034868 Prh1P05142 261 aa2.84□□□□□ -1.95
Clk1-201ENSMUST00000034868 A730009L09RikA0A1B0GS82 72 aa2.84□□□□□ -1.96
Clk1-201ENSMUST00000034868 Kiaa1109A2AAE1 5005 aa2.83□□□□□ -1.96
Clk1-201ENSMUST00000034868 Adgrg4B7ZCC9 3073 aa2.83□□□□□ -1.96
Clk1-201ENSMUST00000034868 4930507D05RikQ8C9C9 103 aa2.83□□□□□ -1.96
Clk1-201ENSMUST00000034868 Mt3P28184 68 aa2.82□□□□□ -1.96
Clk1-201ENSMUST00000034868 4932415D10RikA0A1W2P6U8 4986 aa2.82□□□□□ -1.96
Clk1-201ENSMUST00000034868 PrcdQ00LT2 53 aa2.82□□□□□ -1.96
Clk1-201ENSMUST00000034868 Defb13Q8R2I4 64 aa2.82□□□□□ -1.96
Clk1-201ENSMUST00000034868 Gm28230A0A0A0MQ91 144 aa2.81□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 70.4 ms