RNA–Protein interactions for RNA: ENSMUST00000153031.1

Sh3rf3-205, Transcript of SH3 domain-containing RING finger protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf3, Length 5,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3-205ENSMUST00000153031 Sec61bQ9CQS8 96 aaKnown RBP9.69□□□□□ -0.86
Sh3rf3-205ENSMUST00000153031 BC029722A0A0N4SW31 51 aa9.69□□□□□ -0.86
Sh3rf3-205ENSMUST00000153031 Lelp1Q9DAE3 120 aa9.68□□□□□ -0.86
Sh3rf3-205ENSMUST00000153031 Gm19426M0QWC7 77 aa9.63□□□□□ -0.87
Sh3rf3-205ENSMUST00000153031 Gm5767A0A0J9YTU8 78 aa9.62□□□□□ -0.87
Sh3rf3-205ENSMUST00000153031 AtrQ9JKK8 2635 aa9.6□□□□□ -0.87
Sh3rf3-205ENSMUST00000153031 Gm11565A2A4M7 156 aa9.57□□□□□ -0.88
Sh3rf3-205ENSMUST00000153031 Krtap29-1A2A5X4 342 aa9.53□□□□□ -0.88
Sh3rf3-205ENSMUST00000153031 Gm17349F7BGH6 99 aa9.53□□□□□ -0.88
Sh3rf3-205ENSMUST00000153031 Ep400Q8CHI8 3072 aaKnown RBP9.52□□□□□ -0.89
Sh3rf3-205ENSMUST00000153031 Cox6b2Q80ZN9 88 aa9.5□□□□□ -0.89
Sh3rf3-205ENSMUST00000153031 Gcn1E9PVA8 2671 aaKnown RBP9.47□□□□□ -0.89
Sh3rf3-205ENSMUST00000153031 CenpfE9Q3P4 2997 aaKnown RBP9.46□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 2310050C09RikG5E8Z3 280 aa9.46□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 Gm42715A0A087WP63 3095 aaKnown RBP9.44□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 Dnah12Q3V0Q1 3086 aa9.44□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 Notch1Q01705 2531 aa9.43□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 FlnaQ8BTM8 2647 aaKnown RBP9.41□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 Cep350E9Q309 3095 aa9.4□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 Ndufaf8A2AMZ4 74 aa9.4□□□□□ -0.9
Sh3rf3-205ENSMUST00000153031 SmcpP15265 143 aa9.39□□□□□ -0.91
Sh3rf3-205ENSMUST00000153031 Kmt2bO08550 2713 aa9.39□□□□□ -0.91
Sh3rf3-205ENSMUST00000153031 Gm2310J3QNJ2 377 aa9.38□□□□□ -0.91
Sh3rf3-205ENSMUST00000153031 Krtap13O88375 197 aa9.38□□□□□ -0.91
Sh3rf3-205ENSMUST00000153031 PcntP48725 2898 aa9.37□□□□□ -0.91
Sh3rf3-205ENSMUST00000153031 Gm36176A0A1W2P8D5 158 aa9.35□□□□□ -0.91
Sh3rf3-205ENSMUST00000153031 UtrnE9Q6R7 3430 aa9.33□□□□□ -0.92
Sh3rf3-205ENSMUST00000153031 Akap13E9Q394 2776 aa9.33□□□□□ -0.92
Sh3rf3-205ENSMUST00000153031 Gm9195A0A140LHT4 2805 aa9.27□□□□□ -0.92
Sh3rf3-205ENSMUST00000153031 Krtap14O08640 167 aa9.24□□□□□ -0.93
Sh3rf3-205ENSMUST00000153031 Prrc2cQ3TLH4 2846 aaKnown RBP9.21□□□□□ -0.93
Sh3rf3-205ENSMUST00000153031 Stab1Q8R4Y4 2571 aa9.21□□□□□ -0.94
Sh3rf3-205ENSMUST00000153031 Mast4Q811L6 2618 aa9.2□□□□□ -0.94
Sh3rf3-205ENSMUST00000153031 Prune2Q52KR3 3084 aa9.2□□□□□ -0.94
Sh3rf3-205ENSMUST00000153031 Gm9112A2AI92 75 aa9.2□□□□□ -0.94
Sh3rf3-205ENSMUST00000153031 Rps29P62274 56 aa9.2□□□□□ -0.94
Sh3rf3-205ENSMUST00000153031 Hectd1Q69ZR2 2618 aaKnown RBP9.18□□□□□ -0.94
Sh3rf3-205ENSMUST00000153031 Gm21887J3QQ04 176 aa9.15□□□□□ -0.94
Sh3rf3-205ENSMUST00000153031 D6Ertd527eA0A0N4SWI3 464 aa9.12□□□□□ -0.95
Sh3rf3-205ENSMUST00000153031 Gm9507D3Z5T3 223 aa9.09□□□□□ -0.95
Sh3rf3-205ENSMUST00000153031 NipblQ6KCD5 2798 aaKnown RBP9.09□□□□□ -0.95
Sh3rf3-205ENSMUST00000153031 Jbts17Q8CE72 3214 aa9.07□□□□□ -0.96
Sh3rf3-205ENSMUST00000153031 TrioQ0KL02 3102 aa9.06□□□□□ -0.96
Sh3rf3-205ENSMUST00000153031 Chd6A3KFM7 2711 aa9.03□□□□□ -0.96
Sh3rf3-205ENSMUST00000153031 Map1aQ9QYR6 2776 aa9.03□□□□□ -0.96
Sh3rf3-205ENSMUST00000153031 Tnp1P10856 55 aa9.01□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 Lama3Q61789 3330 aa9.01□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 Tnp2P11378 117 aa9□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 Krtap10-4Q08EG8 221 aa9□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 2310061N02RikQ9D6S9 174 aa8.99□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 Gm40193A0A1B0GT39 78 aa8.99□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 Ubr5Q80TP3 2792 aa8.97□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 Lama2Q60675 3118 aaKnown RBP8.97□□□□□ -0.97
Sh3rf3-205ENSMUST00000153031 Itpr1P11881 2749 aa8.96□□□□□ -0.98
Sh3rf3-205ENSMUST00000153031 Tnrc18Q80WC3 2878 aa8.95□□□□□ -0.98
Sh3rf3-205ENSMUST00000153031 Usp34Q6ZQ93 3582 aa8.94□□□□□ -0.98
Sh3rf3-205ENSMUST00000153031 9530053A07RikE9PVG8 2581 aa8.92□□□□□ -0.98
Sh3rf3-205ENSMUST00000153031 Igsf10Q3V1M1 2594 aa8.9□□□□□ -0.98
Sh3rf3-205ENSMUST00000153031 Krtap10-10A0A1W2P7T6 217 aa8.9□□□□□ -0.98
Sh3rf3-205ENSMUST00000153031 Tep1P97499 2629 aa8.9□□□□□ -0.98
Sh3rf3-205ENSMUST00000153031 Cfap54Q8C6S9 3106 aa8.89□□□□□ -0.99
Sh3rf3-205ENSMUST00000153031 HttP42859 3119 aa8.89□□□□□ -0.99
Sh3rf3-205ENSMUST00000153031 Itpr3P70227 2670 aa8.89□□□□□ -0.99
Sh3rf3-205ENSMUST00000153031 Mki67E9PVX6 3177 aaKnown RBP8.89□□□□□ -0.99
Sh3rf3-205ENSMUST00000153031 Bod1lE9Q6J5 3032 aa8.82□□□□□ -1
Sh3rf3-205ENSMUST00000153031 Chd7A2AJK6 2986 aaKnown RBP8.82□□□□□ -1
Sh3rf3-205ENSMUST00000153031 Ash1lQ99MY8 2958 aa8.81□□□□□ -1
Sh3rf3-205ENSMUST00000153031 Stab2Q8R4U0 2559 aa8.81□□□□□ -1
Sh3rf3-205ENSMUST00000153031 Col12a1Q60847 3120 aa8.78□□□□□ -1
Sh3rf3-205ENSMUST00000153031 Pkd1l1Q8R526 2615 aa8.77□□□□□ -1.01
Sh3rf3-205ENSMUST00000153031 Nbeal2Q6ZQA0 2742 aa8.75□□□□□ -1.01
Sh3rf3-205ENSMUST00000153031 Gm20537G3UYK7 97 aa8.71□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Myo15bI7HPW8 3033 aa8.7□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Rev3lQ61493 3122 aa8.69□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Dmxl1Q6PNC0 3013 aa8.69□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Fbn2Q61555 2907 aa8.68□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 MgaA2AWL7 3003 aaKnown RBP8.68□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Gm7173A0A0G2JEB6 3132 aa8.67□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Cdh23Q99PF4 3354 aa8.67□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Gm5965D3Z724 196 aa8.66□□□□□ -1.02
Sh3rf3-205ENSMUST00000153031 Ranbp2Q9ERU9 3053 aaKnown RBP8.65□□□□□ -1.03
Sh3rf3-205ENSMUST00000153031 Col6a5A6H584 2640 aa8.63□□□□□ -1.03
Sh3rf3-205ENSMUST00000153031 2310057N15RikQ9D6T8 200 aa8.62□□□□□ -1.03
Sh3rf3-205ENSMUST00000153031 Gm2696A0A1W2P709 240 aa8.62□□□□□ -1.03
Sh3rf3-205ENSMUST00000153031 B930094E09RikQ8C4T2 136 aa8.58□□□□□ -1.04
Sh3rf3-205ENSMUST00000153031 Unc80Q8BLN6 3261 aa8.56□□□□□ -1.04
Sh3rf3-205ENSMUST00000153031 Tex15F8VPN2 2785 aa8.54□□□□□ -1.04
Sh3rf3-205ENSMUST00000153031 Szt2A2A9C3 3431 aa8.49□□□□□ -1.05
Sh3rf3-205ENSMUST00000153031 KalrnA2CG49 2964 aa8.49□□□□□ -1.05
Sh3rf3-205ENSMUST00000153031 Hivep1Q03172 2688 aa8.49□□□□□ -1.05
Sh3rf3-205ENSMUST00000153031 FcgbpE9Q0B5 2583 aa8.49□□□□□ -1.05
Sh3rf3-205ENSMUST00000153031 Muc2Q80Z19 2680 aa8.48□□□□□ -1.05
Sh3rf3-205ENSMUST00000153031 Vps13aQ5H8C4 3166 aa8.44□□□□□ -1.06
Sh3rf3-205ENSMUST00000153031 TgO08710 2766 aa8.43□□□□□ -1.06
Sh3rf3-205ENSMUST00000153031 Prm2P07978 107 aa8.43□□□□□ -1.06
Sh3rf3-205ENSMUST00000153031 Frem2Q6NVD0 3160 aa8.4□□□□□ -1.07
Sh3rf3-205ENSMUST00000153031 A930033H14RikG5E8X6 103 aa8.38□□□□□ -1.07
Sh3rf3-205ENSMUST00000153031 Celsr1O35161 3034 aa8.36□□□□□ -1.07
Sh3rf3-205ENSMUST00000153031 Srrm2Q8BTI8 2703 aaKnown RBP8.33□□□□□ -1.08
Sh3rf3-205ENSMUST00000153031 2310079G19RikQ9D6L6 185 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms