RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 CTDSPL2Q05D32 466 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 PPP4R3BQ5MIZ7 849 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 AKNAD1Q5T1N1 836 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 ESR2Q92731 530 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 EHD4Q9H223 541 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 CABP5Q9NP86 173 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 CYP2D7A0A087X1C5 515 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 ADM5C9JUS6 153 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 RANBP6O60518 1105 aaKnown RBP15.31■□□□□ 0.04
PHGDH-220ENST00000641570 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 CYP2D6P10635 497 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 IREB2P48200 963 aaKnown RBP15.31■□□□□ 0.04
PHGDH-220ENST00000641570 MAP1SQ66K74 1059 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-220ENST00000641570 SMC1BQ8NDV3 1235 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 ZNF341Q9BYN7 854 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 SCAF8Q9UPN6 1271 aaKnown RBP15.31■□□□□ 0.04
PHGDH-220ENST00000641570 ATRNL1Q5VV63 1379 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 NAV1Q8NEY1 1877 aa15.31■□□□□ 0.04
PHGDH-220ENST00000641570 DDTLA6NHG4 134 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-220ENST00000641570 POTECB2RU33 542 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 SEC24BO95487 1268 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 CYP21A2P08686 494 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 BLOC1S2Q6QNY1 142 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 ARMC9Q7Z3E5 817 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 JAKMIP1Q96N16 626 aaKnown RBP15.3■□□□□ 0.04
PHGDH-220ENST00000641570 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 GLIS2Q9BZE0 524 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-220ENST00000641570 ANAPC4Q9UJX5 808 aa15.3■□□□□ 0.04
PHGDH-220ENST00000641570 PLCD1P51178 756 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 NECTIN1Q15223 517 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-220ENST00000641570 CCDC178Q5BJE1 867 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 C16orf86Q6ZW13 317 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 CDCA5Q96FF9 252 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
PHGDH-220ENST00000641570 CSADQ9Y600 493 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
PHGDH-220ENST00000641570 ROBO3Q96MS0 1386 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 E7EWF7 191 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 PRDM1O75626 825 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
PHGDH-220ENST00000641570 CDK8P49336 464 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 PRKG1Q13976 671 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 NBPF12Q5TAG4 269 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-220ENST00000641570 MIGA2Q7L4E1 593 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 DYNLL2Q96FJ2 89 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 CCDC17Q96LX7 622 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
PHGDH-220ENST00000641570 FOXP2O15409 715 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 ST18O60284 1047 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 TBC1D12O60347 775 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 MCM5P33992 734 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 TBC1D10CQ8IV04 446 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 C2orf69Q8N8R5 385 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 WRNIP1Q96S55 665 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-220ENST00000641570 SNX14Q9Y5W7 946 aa15.27■□□□□ 0.04
PHGDH-220ENST00000641570 ECM29Q5VYK3 1845 aa15.27■□□□□ 0.03
PHGDH-220ENST00000641570 ORC4O43929 436 aa15.26■□□□□ 0.03
PHGDH-220ENST00000641570 TOMM70O94826 608 aa15.26■□□□□ 0.03
PHGDH-220ENST00000641570 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
PHGDH-220ENST00000641570 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
PHGDH-220ENST00000641570 POTEJP0CG39 1038 aa15.26■□□□□ 0.03
PHGDH-220ENST00000641570 RBM25P49756 843 aaKnown RBP15.26■□□□□ 0.03
PHGDH-220ENST00000641570 RABEP1Q15276 862 aa15.26■□□□□ 0.03
PHGDH-220ENST00000641570 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
PHGDH-220ENST00000641570 ZNF784Q8NCA9 323 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-220ENST00000641570 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
PHGDH-220ENST00000641570 RBM46Q8TBY0 533 aaKnown RBP15.26■□□□□ 0.03
PHGDH-220ENST00000641570 NEDD4P46934 1319 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 FAM196BA6NMK8 535 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 B4E1Z4 1266 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 KDM4AO75164 1064 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 TFAP4Q01664 338 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 ATP2B2Q01814 1243 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 SYNE3Q6ZMZ3 975 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 SH3BP5LQ7L8J4 393 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 SLC44A5Q8NCS7 719 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 SH2D4AQ9H788 454 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
PHGDH-220ENST00000641570 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-220ENST00000641570 ANGEL1Q9UNK9 670 aaKnown RBP15.25■□□□□ 0.03
PHGDH-220ENST00000641570 IFIT3O14879 490 aaKnown RBP15.24■□□□□ 0.03
PHGDH-220ENST00000641570 GDF11O95390 407 aa15.24■□□□□ 0.03
PHGDH-220ENST00000641570 ASNSP08243 561 aa15.24■□□□□ 0.03
PHGDH-220ENST00000641570 FKBP1BP68106 108 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms