RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TRPM7Q96QT4 1865 aa15.8■□□□□ 0.12
GTF3A-209ENST00000640289 RAD50Q92878 1312 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 SGSM2O43147 1006 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 CDC45O75419 566 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 INPP5BP32019 993 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 LDLRAD1Q5T700 205 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 C12orf60Q5U649 245 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 GIMAP6Q6P9H5 292 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
GTF3A-209ENST00000640289 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.79■□□□□ 0.12
GTF3A-209ENST00000640289 RUFY2Q8WXA3 655 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 CLMNQ96JQ2 1002 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 WRNIP1Q96S55 665 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 NAPBQ9H115 298 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 ARPP21Q9UBL0 812 aaPredicted RBP15.79■□□□□ 0.12
GTF3A-209ENST00000640289 NAV1Q8NEY1 1877 aa15.79■□□□□ 0.12
GTF3A-209ENST00000640289 SIPA1L1O43166 1804 aa15.78■□□□□ 0.12
GTF3A-209ENST00000640289 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
GTF3A-209ENST00000640289 TBC1D12O60347 775 aa15.78■□□□□ 0.12
GTF3A-209ENST00000640289 MFAP1P55081 439 aaKnown RBP15.78■□□□□ 0.12
GTF3A-209ENST00000640289 RRP1BQ14684 758 aaKnown RBP15.78■□□□□ 0.12
GTF3A-209ENST00000640289 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.78■□□□□ 0.12
GTF3A-209ENST00000640289 METTL16Q86W50 562 aaKnown RBP15.78■□□□□ 0.12
GTF3A-209ENST00000640289 FOXP4Q8IVH2 680 aaPredicted RBP15.78■□□□□ 0.12
GTF3A-209ENST00000640289 ZKSCAN4Q969J2 545 aaPredicted RBP15.78■□□□□ 0.12
GTF3A-209ENST00000640289 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
GTF3A-209ENST00000640289 EHD4Q9H223 541 aa15.78■□□□□ 0.12
GTF3A-209ENST00000640289 HERC5Q9UII4 1024 aaKnown RBP15.78■□□□□ 0.12
GTF3A-209ENST00000640289 SERPINB13Q9UIV8 391 aa15.78■□□□□ 0.12
GTF3A-209ENST00000640289 ZNF112Q9UJU3 913 aa15.78■□□□□ 0.12
GTF3A-209ENST00000640289 MINDY4BA8MYZ0 360 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 MAP3K9P80192 1104 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 GABPAQ06546 454 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 DEFB115Q30KQ5 88 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 SBK1Q52WX2 424 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 PAXIP1Q6ZW49 1069 aaPredicted RBP15.77■□□□□ 0.12
GTF3A-209ENST00000640289 AMOTL1Q8IY63 956 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 STK11IPQ8N1F8 1099 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.12
GTF3A-209ENST00000640289 RASSF10A6NK89 507 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 FGAP02671 866 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 PTH1RQ03431 593 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 VGLL4Q14135 290 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 ALX1Q15699 326 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 CYP4F22Q6NT55 531 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 RGMBQ6NW40 437 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 SNCAIPQ9Y6H5 919 aa15.76■□□□□ 0.11
GTF3A-209ENST00000640289 MYH1P12882 1939 aa15.75■□□□□ 0.11
GTF3A-209ENST00000640289 GDF11O95390 407 aa15.75■□□□□ 0.11
GTF3A-209ENST00000640289 SHMT1P34896 483 aa15.75■□□□□ 0.11
GTF3A-209ENST00000640289 ZNF157P51786 506 aaPredicted RBP15.75■□□□□ 0.11
GTF3A-209ENST00000640289 JAG1P78504 1218 aa15.75■□□□□ 0.11
GTF3A-209ENST00000640289 PPARAQ07869 468 aa15.75■□□□□ 0.11
GTF3A-209ENST00000640289 GRM1Q13255 1194 aa15.75■□□□□ 0.11
GTF3A-209ENST00000640289 SHROOM1Q2M3G4 852 aaPredicted RBP15.75■□□□□ 0.11
GTF3A-209ENST00000640289 DSCC1Q9BVC3 393 aa15.75■□□□□ 0.11
GTF3A-209ENST00000640289 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.75■□□□□ 0.11
GTF3A-209ENST00000640289 CDK8P49336 464 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 CTDSPL2Q05D32 466 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 TATDN1Q6P1N9 297 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 CASC1Q6TDU7 716 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 C16orf86Q6ZW13 317 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 RASAL3Q86YV0 1011 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 SLC10A4Q96EP9 437 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 HHIPL1Q96JK4 782 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 CSADQ9Y600 493 aa15.74■□□□□ 0.11
GTF3A-209ENST00000640289 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
GTF3A-209ENST00000640289 ZMYM6O95789 1325 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 UNCXA6NJT0 531 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 CTNND1O60716 968 aaKnown RBP15.73■□□□□ 0.11
GTF3A-209ENST00000640289 CAP2P40123 477 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 HAND2P61296 217 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
GTF3A-209ENST00000640289 NOL9Q5SY16 702 aaKnown RBP15.73■□□□□ 0.11
GTF3A-209ENST00000640289 CCDC84Q86UT8 332 aaPredicted RBP15.73■□□□□ 0.11
GTF3A-209ENST00000640289 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 ROBO3Q96MS0 1386 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 OTOFQ9HC10 1997 aa15.73■□□□□ 0.11
GTF3A-209ENST00000640289 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
GTF3A-209ENST00000640289 PRDM1O75626 825 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 SLC10A3P09131 477 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 GJA5P36382 358 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 VEGFBP49765 207 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
GTF3A-209ENST00000640289 CAPNS2Q96L46 248 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 LSG1Q9H089 658 aaKnown RBP15.72■□□□□ 0.11
GTF3A-209ENST00000640289 ANO2Q9NQ90 1003 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 INCENPQ9NQS7 918 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 SWAP70Q9UH65 585 aa15.72■□□□□ 0.11
GTF3A-209ENST00000640289 AOC2O75106 756 aa15.71■□□□□ 0.11
GTF3A-209ENST00000640289 PTPRAP18433 802 aa15.71■□□□□ 0.11
GTF3A-209ENST00000640289 OPTNQ96CV9 577 aa15.71■□□□□ 0.11
GTF3A-209ENST00000640289 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms