RNA–Protein interactions for RNA: ENST00000638160.1

CHML-205, Transcript of CHM like, Rab escort protein 2, human

TSL 3 BASIC

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHML-205	ENST00000638160	RIOK1	Q9BRS2	568 aa	Known RBP	32.54	■■■□□ 2.8
CHML-205	ENST00000638160	ZNF532	Q9HCE3	1301 aa		32.53	■■■□□ 2.8
CHML-205	ENST00000638160	HDAC1	Q13547	482 aa	Predicted RBP	32.53	■■■□□ 2.8
CHML-205	ENST00000638160	METTL16	Q86W50	562 aa	Known RBP	32.53	■■■□□ 2.8
CHML-205	ENST00000638160	FAM43A	Q8N2R8	423 aa		32.53	■■■□□ 2.8
CHML-205	ENST00000638160	ABHD8	Q96I13	439 aa		32.53	■■■□□ 2.8
CHML-205	ENST00000638160	PALD1	Q9ULE6	856 aa		32.53	■■■□□ 2.8
CHML-205	ENST00000638160	ZHX2	Q9Y6X8	837 aa		32.53	■■■□□ 2.8
CHML-205	ENST00000638160	TCRBV5S4A2T	A0A5A2	114 aa		32.52	■■■□□ 2.8
CHML-205	ENST00000638160	FAM196B	A6NMK8	535 aa		32.52	■■■□□ 2.8
CHML-205	ENST00000638160	ZFYVE28	Q9HCC9	887 aa		32.52	■■■□□ 2.8
CHML-205	ENST00000638160	BTBD19	C9JJ37	291 aa		32.51	■■■□□ 2.79
CHML-205	ENST00000638160	HLA-DOA	P06340	250 aa		32.51	■■■□□ 2.79
CHML-205	ENST00000638160	TAF1C	Q15572	869 aa	Predicted RBP	32.51	■■■□□ 2.79
CHML-205	ENST00000638160	ADD2	P35612	726 aa		32.5	■■■□□ 2.79
CHML-205	ENST00000638160	GCC1	Q96CN9	775 aa		32.5	■■■□□ 2.79
CHML-205	ENST00000638160	SAP30BP	Q9UHR5	308 aa	Known RBP	32.5	■■■□□ 2.79
CHML-205	ENST00000638160	AFG3L2	Q9Y4W6	797 aa		32.5	■■■□□ 2.79
CHML-205	ENST00000638160	CAPN15	O75808	1086 aa		32.49	■■■□□ 2.79
CHML-205	ENST00000638160	CAP2	P40123	477 aa		32.49	■■■□□ 2.79
CHML-205	ENST00000638160	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.49	■■■□□ 2.79
CHML-205	ENST00000638160	TRIM34	Q9BYJ4	488 aa		32.49	■■■□□ 2.79
CHML-205	ENST00000638160	CRNKL1	Q9BZJ0	848 aa	Known RBP	32.49	■■■□□ 2.79
CHML-205	ENST00000638160	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.49	■■■□□ 2.79
CHML-205	ENST00000638160	PKN2	Q16513	984 aa	Known RBP	32.48	■■■□□ 2.79
CHML-205	ENST00000638160	ZSCAN25	Q6NSZ9	544 aa		32.48	■■■□□ 2.79
CHML-205	ENST00000638160	ANKRD23	Q86SG2	305 aa		32.48	■■■□□ 2.79
CHML-205	ENST00000638160	UBE3C	Q15386	1083 aa		32.47	■■■□□ 2.79
CHML-205	ENST00000638160	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.47	■■■□□ 2.79
CHML-205	ENST00000638160	TTC41P	Q6P2S7	1318 aa		32.47	■■■□□ 2.79
CHML-205	ENST00000638160	FASTKD5	Q7L8L6	764 aa	Known RBP	32.46	■■■□□ 2.79
CHML-205	ENST00000638160	TTC6	Q86TZ1	520 aa		32.46	■■■□□ 2.79
CHML-205	ENST00000638160	TBC1D2	Q9BYX2	928 aa		32.46	■■■□□ 2.79
CHML-205	ENST00000638160	FOCAD	Q5VW36	1801 aa		32.46	■■■□□ 2.79
CHML-205	ENST00000638160	MOGS	Q13724	837 aa		32.45	■■■□□ 2.79
CHML-205	ENST00000638160	CDK5RAP2	Q96SN8	1893 aa		32.44	■■■□□ 2.78
CHML-205	ENST00000638160		A0A0G2JLL6	359 aa	Predicted RBP	32.44	■■■□□ 2.78
CHML-205	ENST00000638160	ERC2	O15083	957 aa		32.44	■■■□□ 2.78
CHML-205	ENST00000638160	SP3	Q02447	781 aa		32.44	■■■□□ 2.78
CHML-205	ENST00000638160	RRP1B	Q14684	758 aa	Known RBP	32.44	■■■□□ 2.78
CHML-205	ENST00000638160	ANKRD45	Q5TZF3	282 aa		32.44	■■■□□ 2.78
CHML-205	ENST00000638160	PRRT2	Q7Z6L0	340 aa	Predicted RBP	32.44	■■■□□ 2.78
CHML-205	ENST00000638160	ERO1A	Q96HE7	468 aa		32.44	■■■□□ 2.78
CHML-205	ENST00000638160	DNAJC18	Q9H819	358 aa		32.44	■■■□□ 2.78
CHML-205	ENST00000638160	GINM1	Q9NU53	330 aa		32.44	■■■□□ 2.78
CHML-205	ENST00000638160	TSHZ3	Q63HK5	1081 aa		32.43	■■■□□ 2.78
CHML-205	ENST00000638160	EHD4	Q9H223	541 aa		32.43	■■■□□ 2.78
CHML-205	ENST00000638160	RWDD1	Q9H446	243 aa	Predicted RBP	32.43	■■■□□ 2.78
CHML-205	ENST00000638160	PDHX	O00330	501 aa		32.42	■■■□□ 2.78
CHML-205	ENST00000638160	TLR2	O60603	784 aa		32.42	■■■□□ 2.78
CHML-205	ENST00000638160	ASNS	P08243	561 aa		32.42	■■■□□ 2.78
CHML-205	ENST00000638160	LCORL	Q8N3X6	602 aa		32.42	■■■□□ 2.78
CHML-205	ENST00000638160	KBTBD3	Q8NAB2	608 aa		32.42	■■■□□ 2.78
CHML-205	ENST00000638160	EXOC6	Q8TAG9	804 aa		32.42	■■■□□ 2.78
CHML-205	ENST00000638160	SERPINB13	Q9UIV8	391 aa		32.42	■■■□□ 2.78
CHML-205	ENST00000638160	TRIM75P	A6NK02	468 aa		32.41	■■■□□ 2.78
CHML-205	ENST00000638160	USP17L5	A8MUK1	530 aa		32.41	■■■□□ 2.78
CHML-205	ENST00000638160	ARMT1	Q9H993	441 aa		32.41	■■■□□ 2.78
CHML-205	ENST00000638160	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	32.41	■■■□□ 2.78
CHML-205	ENST00000638160	DOCK1	Q14185	1865 aa		32.41	■■■□□ 2.78
CHML-205	ENST00000638160	GLRX3	O76003	335 aa	Known RBP	32.4	■■■□□ 2.78
CHML-205	ENST00000638160	MBD4	O95243	580 aa		32.4	■■■□□ 2.78
CHML-205	ENST00000638160	POLR3D	P05423	398 aa	Predicted RBP	32.4	■■■□□ 2.78
CHML-205	ENST00000638160	SLC4A8	Q2Y0W8	1093 aa		32.4	■■■□□ 2.78
CHML-205	ENST00000638160	SLFNL1	Q499Z3	407 aa		32.4	■■■□□ 2.78
CHML-205	ENST00000638160	GPAT2	Q6NUI2	795 aa		32.4	■■■□□ 2.78
CHML-205	ENST00000638160	ZNF280C	Q8ND82	737 aa		32.4	■■■□□ 2.78
CHML-205	ENST00000638160	AS3MT	Q9HBK9	375 aa		32.4	■■■□□ 2.78
CHML-205	ENST00000638160	MX1	P20591	662 aa		32.39	■■■□□ 2.78
CHML-205	ENST00000638160	SPP2	Q13103	211 aa		32.39	■■■□□ 2.78
CHML-205	ENST00000638160	CCDC84	Q86UT8	332 aa	Predicted RBP	32.39	■■■□□ 2.78
CHML-205	ENST00000638160	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.39	■■■□□ 2.78
CHML-205	ENST00000638160	DCP1A	Q9NPI6	582 aa	Predicted RBP	32.39	■■■□□ 2.78
CHML-205	ENST00000638160	ATP8A2	Q9NTI2	1148 aa		32.39	■■■□□ 2.78
CHML-205	ENST00000638160	MCM9	Q9NXL9	1143 aa		32.39	■■■□□ 2.78
CHML-205	ENST00000638160	TATDN1	Q6P1N9	297 aa		32.38	■■■□□ 2.77
CHML-205	ENST00000638160	PI4K2B	Q8TCG2	481 aa		32.38	■■■□□ 2.77
CHML-205	ENST00000638160	SDR42E1	Q8WUS8	393 aa		32.38	■■■□□ 2.77
CHML-205	ENST00000638160	SLC45A1	Q9Y2W3	748 aa		32.38	■■■□□ 2.77
CHML-205	ENST00000638160	SIPA1L1	O43166	1804 aa		32.37	■■■□□ 2.77
CHML-205	ENST00000638160	PLCD1	P51178	756 aa		32.37	■■■□□ 2.77
CHML-205	ENST00000638160	ARHGEF6	Q15052	776 aa		32.37	■■■□□ 2.77
CHML-205	ENST00000638160	LRRFIP1	Q32MZ4	808 aa	Known RBP	32.37	■■■□□ 2.77
CHML-205	ENST00000638160	GADL1	Q6ZQY3	521 aa		32.37	■■■□□ 2.77
CHML-205	ENST00000638160	WDR18	Q9BV38	432 aa		32.37	■■■□□ 2.77
CHML-205	ENST00000638160	MYH1	P12882	1939 aa		32.37	■■■□□ 2.77
CHML-205	ENST00000638160	CCDC85C	A6NKD9	419 aa		32.36	■■■□□ 2.77
CHML-205	ENST00000638160	CHGB	P05060	677 aa		32.36	■■■□□ 2.77
CHML-205	ENST00000638160	ZFY	P08048	801 aa	Predicted RBP	32.36	■■■□□ 2.77
CHML-205	ENST00000638160	CD99L2	Q8TCZ2	262 aa		32.36	■■■□□ 2.77
CHML-205	ENST00000638160	PARK7	Q99497	189 aa	Known RBP	32.36	■■■□□ 2.77
CHML-205	ENST00000638160	TRIM17	Q9Y577	477 aa		32.36	■■■□□ 2.77
CHML-205	ENST00000638160	FBXO46	Q6PJ61	603 aa	Predicted RBP	32.35	■■■□□ 2.77
CHML-205	ENST00000638160	PUS7L	Q9H0K6	701 aa	Known RBP	32.35	■■■□□ 2.77
CHML-205	ENST00000638160	TAOK2	Q9UL54	1235 aa		32.35	■■■□□ 2.77
CHML-205	ENST00000638160	SALL3	Q9BXA9	1300 aa		32.34	■■■□□ 2.77
CHML-205	ENST00000638160	RNF113A	O15541	343 aa	Known RBP	32.34	■■■□□ 2.77
CHML-205	ENST00000638160	GDF11	O95390	407 aa		32.34	■■■□□ 2.77
CHML-205	ENST00000638160	JAG1	P78504	1218 aa		32.34	■■■□□ 2.77
CHML-205	ENST00000638160	C17orf99	Q6UX52	265 aa		32.34	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms