RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 VSTM4Q8IW00 320 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 SLC4A4Q9Y6R1 1079 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 SLIT2O94813 1529 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 SPDYE4A6NLX3 237 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 PARP10Q53GL7 1025 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 UTP14AQ9BVJ6 771 aaKnown RBP22.03■■□□□ 1.12
PTBP1-220ENST00000627714 TMX1Q9H3N1 280 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 INCENPQ9NQS7 918 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 DDX41Q9UJV9 622 aaKnown RBP22.03■■□□□ 1.12
PTBP1-220ENST00000627714 MORC2Q9Y6X9 1032 aaPredicted RBP22.03■■□□□ 1.12
PTBP1-220ENST00000627714 BTBD18B2RXH4 712 aa22.02■■□□□ 1.12
PTBP1-220ENST00000627714 EXOC5O00471 708 aa22.02■■□□□ 1.12
PTBP1-220ENST00000627714 EIF5P55010 431 aaKnown RBP22.02■■□□□ 1.12
PTBP1-220ENST00000627714 MDM2Q00987 491 aaPredicted RBP22.02■■□□□ 1.12
PTBP1-220ENST00000627714 NT5DC1Q5TFE4 455 aa22.02■■□□□ 1.12
PTBP1-220ENST00000627714 KANK3Q6NY19 840 aa22.02■■□□□ 1.12
PTBP1-220ENST00000627714 STK11IPQ8N1F8 1099 aa22.02■■□□□ 1.12
PTBP1-220ENST00000627714 TRIML1Q8N9V2 468 aa22.02■■□□□ 1.12
PTBP1-220ENST00000627714 PRDM4Q9UKN5 801 aa22.02■■□□□ 1.12
PTBP1-220ENST00000627714 IGHMBP2P38935 993 aaKnown RBP22.02■■□□□ 1.11
PTBP1-220ENST00000627714 NAA30Q147X3 362 aaPredicted RBP22.02■■□□□ 1.11
PTBP1-220ENST00000627714 CRACR2BQ8N4Y2 399 aaPredicted RBP22.02■■□□□ 1.11
PTBP1-220ENST00000627714 MLKLQ8NB16 471 aa22.02■■□□□ 1.11
PTBP1-220ENST00000627714 FBXO2Q9UK22 296 aaPredicted RBP22.02■■□□□ 1.11
PTBP1-220ENST00000627714 TACC3Q9Y6A5 838 aa22.02■■□□□ 1.11
PTBP1-220ENST00000627714 PHLPP2Q6ZVD8 1323 aa22.01■■□□□ 1.11
PTBP1-220ENST00000627714 TOP1P11387 765 aaKnown RBP22.01■■□□□ 1.11
PTBP1-220ENST00000627714 TOB1P50616 345 aaPredicted RBP22.01■■□□□ 1.11
PTBP1-220ENST00000627714 POSTNQ15063 836 aa22.01■■□□□ 1.11
PTBP1-220ENST00000627714 SUSD4Q5VX71 490 aa22.01■■□□□ 1.11
PTBP1-220ENST00000627714 LCORLQ8N3X6 602 aa22.01■■□□□ 1.11
PTBP1-220ENST00000627714 PRDM10Q9NQV6 1147 aa22.01■■□□□ 1.11
PTBP1-220ENST00000627714 LAMB2P55268 1798 aa22.01■■□□□ 1.11
PTBP1-220ENST00000627714 FOXP4Q8IVH2 680 aaPredicted RBP22■■□□□ 1.11
PTBP1-220ENST00000627714 TOMM22Q9NS69 142 aa22■■□□□ 1.11
PTBP1-220ENST00000627714 RRP12Q5JTH9 1297 aaKnown RBP22■■□□□ 1.11
PTBP1-220ENST00000627714 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
PTBP1-220ENST00000627714 CCDC34Q96HJ3 373 aa22■■□□□ 1.11
PTBP1-220ENST00000627714 FANCLQ9NW38 375 aa22■■□□□ 1.11
PTBP1-220ENST00000627714 GUCY1A2P33402 732 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 ETF1P62495 437 aaKnown RBP21.99■■□□□ 1.11
PTBP1-220ENST00000627714 CCDC93Q567U6 631 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 SYT10Q6XYQ8 523 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 FANCBQ8NB91 859 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 UBAC1Q9BSL1 405 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 ANAPC4Q9UJX5 808 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 SRPRBQ9Y5M8 271 aaKnown RBP21.99■■□□□ 1.11
PTBP1-220ENST00000627714 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 WNK3Q9BYP7 1800 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 PRKAB2O43741 272 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 ZNF654Q8IZM8 581 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 DPF2Q92785 391 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 RNF26Q9BY78 433 aaPredicted RBP21.99■■□□□ 1.11
PTBP1-220ENST00000627714 LRP2BPQ9P2M1 347 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 TAOK2Q9UL54 1235 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 PHLPP1O60346 1717 aa21.99■■□□□ 1.11
PTBP1-220ENST00000627714 UBE2Q2LH0YL09 131 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 ZSCAN12O43309 604 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 XBP1P17861 261 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 PPARAQ07869 468 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 HOMER1Q86YM7 354 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 ENOX1Q8TC92 643 aaKnown RBP21.98■■□□□ 1.11
PTBP1-220ENST00000627714 SMARCE1Q969G3 411 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 CCDC87Q9NVE4 849 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 MAN1B1Q9UKM7 699 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 KCNJ14Q9UNX9 436 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 DOT1LQ8TEK3 1739 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 ARHGAP6O43182 974 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 SARSP49591 514 aaKnown RBP21.98■■□□□ 1.11
PTBP1-220ENST00000627714 CT47A1Q5JQC4 288 aaPredicted RBP21.98■■□□□ 1.11
PTBP1-220ENST00000627714 ESR2Q92731 530 aa21.98■■□□□ 1.11
PTBP1-220ENST00000627714 BMP6P22004 513 aa21.97■■□□□ 1.11
PTBP1-220ENST00000627714 BCAMP50895 628 aa21.97■■□□□ 1.11
PTBP1-220ENST00000627714 ELF2Q15723 593 aa21.97■■□□□ 1.11
PTBP1-220ENST00000627714 SRRTQ9BXP5 876 aaKnown RBP21.97■■□□□ 1.11
PTBP1-220ENST00000627714 SEC31BQ9NQW1 1179 aa21.97■■□□□ 1.11
PTBP1-220ENST00000627714 ZNF335Q9H4Z2 1342 aaPredicted RBP21.97■■□□□ 1.11
PTBP1-220ENST00000627714 RREB1Q92766 1687 aa21.97■■□□□ 1.11
PTBP1-220ENST00000627714 POLR2DO15514 142 aaKnown RBP21.96■■□□□ 1.11
PTBP1-220ENST00000627714 MORC3Q14149 939 aa21.96■■□□□ 1.11
PTBP1-220ENST00000627714 KMT5BQ4FZB7 885 aa21.96■■□□□ 1.11
PTBP1-220ENST00000627714 CDC5LQ99459 802 aaKnown RBP21.96■■□□□ 1.11
PTBP1-220ENST00000627714 ZKSCAN3Q9BRR0 538 aa21.96■■□□□ 1.11
PTBP1-220ENST00000627714 GOLGA6L9A6NEM1 432 aa21.96■■□□□ 1.11
PTBP1-220ENST00000627714 COL22A1Q8NFW1 1626 aaPredicted RBP21.95■■□□□ 1.11
PTBP1-220ENST00000627714 ZNF18P17022 549 aa21.95■■□□□ 1.1
PTBP1-220ENST00000627714 AKAP17AQ02040 695 aaKnown RBP21.95■■□□□ 1.1
PTBP1-220ENST00000627714 PDE4BQ07343 736 aa21.95■■□□□ 1.1
PTBP1-220ENST00000627714 INTS5Q6P9B9 1019 aaKnown RBP21.95■■□□□ 1.1
PTBP1-220ENST00000627714 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.95■■□□□ 1.13e-9■■□□□ 11.7
PTBP1-220ENST00000627714 BCL9LQ86UU0 1499 aa21.95■■□□□ 1.1
PTBP1-220ENST00000627714 BMP15O95972 392 aa21.95■■□□□ 1.1
PTBP1-220ENST00000627714 GABPB1Q06547 395 aaPredicted RBP21.95■■□□□ 1.1
PTBP1-220ENST00000627714 TBX2Q13207 712 aaPredicted RBP21.95■■□□□ 1.1
PTBP1-220ENST00000627714 NUTM2AQ8IVF1 878 aaPredicted RBP21.95■■□□□ 1.1
PTBP1-220ENST00000627714 SERTAD1Q9UHV2 236 aa21.95■■□□□ 1.1
PTBP1-220ENST00000627714 PCDHB6Q9Y5E3 794 aa21.95■■□□□ 1.1
PTBP1-220ENST00000627714 KAT6BQ8WYB5 2073 aa21.95■■□□□ 1.1
PTBP1-220ENST00000627714 CICQ96RK0 1608 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms