RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ADH5P11766 374 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 IMPDH2P12268 514 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 NUTM2GQ5VZR2 741 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 ANKS3Q6ZW76 656 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 AGGF1Q8N302 714 aaeCLIP6.33□□□□□ -1.4
CDR1-202ENST00000625883 ANTXR1Q9H6X2 564 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 DISC1Q9NRI5 854 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 REV1Q9UBZ9 1251 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 PRKAG3Q9UGI9 489 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 MEIS3P2A8K0S8 358 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 SMAD7O15105 426 aaKnown RBP6.32□□□□□ -1.4
CDR1-202ENST00000625883 DRD2P14416 443 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 COL8A1P27658 744 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 GRK4P32298 578 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 CCDC144BQ3MJ40 725 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 ZBTB37Q5TC79 503 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 CKAP2LQ8IYA6 745 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 HNRNPLLQ8WVV9 542 aaKnown RBP6.32□□□□□ -1.4
CDR1-202ENST00000625883 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
CDR1-202ENST00000625883 PLCG1P19174 1290 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 SOX4Q06945 474 aaPredicted RBP6.31□□□□□ -1.4
CDR1-202ENST00000625883 SERINC3Q13530 473 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 TMEM201Q5SNT2 666 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 SOGA3Q5TF21 947 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 NBPF6Q5VWK0 638 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 TMEM130Q8N3G9 435 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 NBPF4Q96M43 638 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 GSX1Q9H4S2 264 aaPredicted RBP6.31□□□□□ -1.4
CDR1-202ENST00000625883 CYP4F12Q9HCS2 524 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 AP4E1Q9UPM8 1137 aa6.31□□□□□ -1.4
CDR1-202ENST00000625883 C9orf172C9J069 976 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 FANCGO15287 622 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 ALX3O95076 343 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 PGRP06401 933 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 NEFMP07197 916 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 NRG1Q02297 640 aaPredicted RBP6.3□□□□□ -1.4
CDR1-202ENST00000625883 PDE4BQ07343 736 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 OVOS1Q6IE37 1185 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 RUFY4Q6ZNE9 571 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 Q6ZS46 218 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 C2CD4AQ8NCU7 369 aaPredicted RBP6.3□□□□□ -1.4
CDR1-202ENST00000625883 RNF214Q8ND24 703 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 OR6P1Q8NGX9 317 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 ACSF2Q96CM8 615 aaPredicted RBP6.3□□□□□ -1.4
CDR1-202ENST00000625883 CRBNQ96SW2 442 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 OSBPL2Q9H1P3 480 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 ADAM30Q9UKF2 790 aa6.3□□□□□ -1.4
CDR1-202ENST00000625883 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 MSTNO14793 375 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 ETF1P62495 437 aaKnown RBP6.29□□□□□ -1.4
CDR1-202ENST00000625883 RAB33AQ14088 237 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 TTLL4Q14679 1199 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 PLA2G4EQ3MJ16 856 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 GPAT2Q6NUI2 795 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
CDR1-202ENST00000625883 TNKS2Q9H2K2 1166 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 ATXN3LQ9H3M9 355 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 PIF1Q9H611 641 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 FBRSQ9HAH7 460 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 GMIPQ9P107 970 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 TJP2Q9UDY2 1190 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 ACTL7BQ9Y614 415 aa6.29□□□□□ -1.4
CDR1-202ENST00000625883 KRBA1A5PL33 1030 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 HCLS1P14317 486 aaPredicted RBP6.28□□□□□ -1.4
CDR1-202ENST00000625883 PREPP48147 710 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 LRRFIP1Q32MZ4 808 aaKnown RBP6.28□□□□□ -1.4
CDR1-202ENST00000625883 TNNI3KQ59H18 835 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 ANKRD34AQ69YU3 496 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 FDX2Q6P4F2 183 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 C12orf50Q8NA57 414 aaPredicted RBP6.28□□□□□ -1.4
CDR1-202ENST00000625883 ATG4CQ96DT6 458 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 AKTIPQ9H8T0 292 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 FAM105AQ9NUU6 356 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 CHURC1-FNTBB4DL54 471 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 CASP7P55210 303 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 NKG7Q16617 165 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 DYMQ7RTS9 669 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 CELF2-AS1Q8N7Q2 184 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 C19orf47Q8N9M1 422 aaKnown RBP6.28□□□□□ -1.4
CDR1-202ENST00000625883 TM9SF2Q99805 663 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 ZSWIM4Q9H7M6 989 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 CNNM2Q9H8M5 875 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 PICK1Q9NRD5 415 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 ACTR10Q9NZ32 417 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 KLHL3Q9UH77 587 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 USP21Q9UK80 565 aa6.28□□□□□ -1.4
CDR1-202ENST00000625883 UPK3BL1B0FP48 263 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 UPK3BL2E5RIL1 263 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 ACRP10323 421 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 NME1P15531 152 aaKnown RBP6.27□□□□□ -1.41
CDR1-202ENST00000625883 GUCY2CP25092 1073 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 NOS3P29474 1203 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 CDCP2Q5VXM1 449 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 GIMAP6Q6P9H5 292 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 MCATQ8IVS2 390 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms