RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CPLX2Q6PUV4 134 aaKnown RBP22.93■■□□□ 1.26
TREX1-205ENST00000625293 SP8Q8IXZ3 490 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 STK11IPQ8N1F8 1099 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 TMTC2Q8N394 836 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 PGBD1Q96JS3 809 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 ZKSCAN3Q9BRR0 538 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 MYL10Q9BUA6 226 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 RCOR1Q9UKL0 485 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 STK36Q9NRP7 1315 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 MKRN1Q9UHC7 482 aaKnown RBP22.92■■□□□ 1.26
TREX1-205ENST00000625293 BAZ2AQ9UIF9 1905 aaKnown RBP22.92■■□□□ 1.26
TREX1-205ENST00000625293 LAMB1P07942 1786 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 PPEF1O14829 653 aaPredicted RBP22.91■■□□□ 1.26
TREX1-205ENST00000625293 SRGNP10124 158 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 PPP4CP60510 307 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 TSPY26PQ9H489 355 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 ARPP21Q9UBL0 812 aaPredicted RBP22.91■■□□□ 1.26
TREX1-205ENST00000625293 ERICH2A1L162 156 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 ORC4O43929 436 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 LIG1P18858 919 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 GSTO1P78417 241 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 CCDC144CPQ8IYA2 1237 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 ZNF396Q96N95 335 aaPredicted RBP22.91■■□□□ 1.26
TREX1-205ENST00000625293 USP28Q96RU2 1077 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 ATP6V0A2Q9Y487 856 aa22.91■■□□□ 1.26
TREX1-205ENST00000625293 IFNAR1P17181 557 aa22.9■■□□□ 1.26
TREX1-205ENST00000625293 DALRD3Q5D0E6 543 aaKnown RBP22.9■■□□□ 1.26
TREX1-205ENST00000625293 SYNE3Q6ZMZ3 975 aa22.9■■□□□ 1.26
TREX1-205ENST00000625293 UBAC1Q9BSL1 405 aa22.9■■□□□ 1.26
TREX1-205ENST00000625293 GJB4Q9NTQ9 266 aa22.9■■□□□ 1.26
TREX1-205ENST00000625293 ZNF219Q9P2Y4 722 aaPredicted RBP22.9■■□□□ 1.26
TREX1-205ENST00000625293 TNKSO95271 1327 aa22.9■■□□□ 1.26
TREX1-205ENST00000625293 BRCA1P38398 1863 aaKnown RBP22.89■■□□□ 1.26
TREX1-205ENST00000625293 NPR1P16066 1061 aa22.89■■□□□ 1.26
TREX1-205ENST00000625293 EVX2Q03828 476 aa22.89■■□□□ 1.26
TREX1-205ENST00000625293 TPRNQ4KMQ1 711 aa22.89■■□□□ 1.26
TREX1-205ENST00000625293 PHKBQ93100 1093 aa22.89■■□□□ 1.26
TREX1-205ENST00000625293 ALG1Q9BT22 464 aa22.89■■□□□ 1.26
TREX1-205ENST00000625293 COL11A2P13942 1736 aaPredicted RBP22.89■■□□□ 1.25
TREX1-205ENST00000625293 IARSP41252 1262 aaKnown RBP22.89■■□□□ 1.25
TREX1-205ENST00000625293 KIF23Q02241 960 aaPredicted RBP22.89■■□□□ 1.25
TREX1-205ENST00000625293 ZNF654Q8IZM8 581 aa22.89■■□□□ 1.25
TREX1-205ENST00000625293 AIFM3Q96NN9 605 aa22.89■■□□□ 1.25
TREX1-205ENST00000625293 ZSCAN10Q96SZ4 725 aaPredicted RBP22.89■■□□□ 1.25
TREX1-205ENST00000625293 FUCA2Q9BTY2 467 aa22.89■■□□□ 1.25
TREX1-205ENST00000625293 FTOQ9C0B1 505 aaKnown RBP eCLIP22.89■■□□□ 1.25
TREX1-205ENST00000625293 MROH7-TTC4A0A0A0MT08 1334 aa22.88■■□□□ 1.25
TREX1-205ENST00000625293 FMNL1O95466 1100 aaPredicted RBP22.88■■□□□ 1.25
TREX1-205ENST00000625293 DIXDC1Q155Q3 683 aa22.88■■□□□ 1.25
TREX1-205ENST00000625293 RTN1Q16799 776 aa22.88■■□□□ 1.25
TREX1-205ENST00000625293 BRAPQ7Z569 592 aa22.88■■□□□ 1.25
TREX1-205ENST00000625293 ENAHQ8N8S7 591 aaPredicted RBP22.88■■□□□ 1.25
TREX1-205ENST00000625293 RTFDC1Q9BY42 306 aaPredicted RBP22.88■■□□□ 1.25
TREX1-205ENST00000625293 FAM205AQ6ZU69 1335 aa22.87■■□□□ 1.25
TREX1-205ENST00000625293 KIF28PB7ZC32 967 aa22.87■■□□□ 1.25
TREX1-205ENST00000625293 CYP2D6P10635 497 aa22.87■■□□□ 1.25
TREX1-205ENST00000625293 TTLL6Q8N841 843 aa22.87■■□□□ 1.25
TREX1-205ENST00000625293 RTEL1Q9NZ71 1219 aa22.87■■□□□ 1.25
TREX1-205ENST00000625293 ECM29Q5VYK3 1845 aa22.87■■□□□ 1.25
TREX1-205ENST00000625293 GRIN3BO60391 1043 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 PRDM1O75626 825 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 LDHCP07864 332 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 NBPF11Q86T75 865 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 SH3RF3Q8TEJ3 882 aaPredicted RBP22.86■■□□□ 1.25
TREX1-205ENST00000625293 PPP1R9BQ96SB3 815 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 DLEC1Q9Y238 1755 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 GOLGA6L4A6NEF3 574 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 SSRP1Q08945 709 aaKnown RBP22.86■■□□□ 1.25
TREX1-205ENST00000625293 KRT40Q6A162 431 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 ARHGAP27Q6ZUM4 889 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 MASTLQ96GX5 879 aa22.86■■□□□ 1.25
TREX1-205ENST00000625293 ROBO3Q96MS0 1386 aa22.85■■□□□ 1.25
TREX1-205ENST00000625293 BAG3O95817 575 aa22.85■■□□□ 1.25
TREX1-205ENST00000625293 PPP2R5BQ15173 497 aa22.85■■□□□ 1.25
TREX1-205ENST00000625293 MYSM1Q5VVJ2 828 aa22.85■■□□□ 1.25
TREX1-205ENST00000625293 FANCBQ8NB91 859 aa22.85■■□□□ 1.25
TREX1-205ENST00000625293 DDX19AQ9NUU7 478 aaKnown RBP22.85■■□□□ 1.25
TREX1-205ENST00000625293 CCDC196A0A1B0GTZ2 297 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 C6orf229H3BNL8 230 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 SLC3A2P08195 630 aaKnown RBP22.84■■□□□ 1.25
TREX1-205ENST00000625293 NT5C2P49902 561 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 CEBPZQ03701 1054 aaKnown RBP22.84■■□□□ 1.25
TREX1-205ENST00000625293 C12orf60Q5U649 245 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 OLFM4Q6UX06 510 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 IQCA1Q86XH1 822 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 CERS3Q8IU89 383 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 TBC1D22AQ8WUA7 517 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 FAM163AQ96GL9 167 aaPredicted RBP22.84■■□□□ 1.25
TREX1-205ENST00000625293 SLC26A6Q9BXS9 759 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 MCM9Q9NXL9 1143 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 DACT1Q9NYF0 836 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 GPR75-ASB3A0A0A6YYF3 556 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 C21orf2O43822 256 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 USP17L8P0C7I0 530 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 ALDH1B1P30837 517 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 CCDC173Q0VFZ6 552 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 CRACR2BQ8N4Y2 399 aaPredicted RBP22.84■■□□□ 1.25
TREX1-205ENST00000625293 POLR3EQ9NVU0 708 aa22.84■■□□□ 1.25
TREX1-205ENST00000625293 UBE2Q2LH0YL09 131 aa22.83■■□□□ 1.24
TREX1-205ENST00000625293 RBM43Q6ZSC3 357 aaKnown RBP22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms