RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MRPS27Q92552 414 aaKnown RBP22.89■■□□□ 1.25
PCDHB11-202ENST00000624887 CRNKL1Q9BZJ0 848 aaKnown RBP22.89■■□□□ 1.25
PCDHB11-202ENST00000624887 TNKSO95271 1327 aa22.89■■□□□ 1.25
PCDHB11-202ENST00000624887 XDHP47989 1333 aa22.89■■□□□ 1.25
PCDHB11-202ENST00000624887 KIAA1551Q9HCM1 1747 aa22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 MYH2Q9UKX2 1941 aa22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 U2AF2P26368 475 aaKnown RBP eCLIP22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 SF3A1Q15459 793 aaKnown RBP22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 CRY2Q49AN0 593 aa22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 ANO6Q4KMQ2 910 aa22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 ATP8A2Q9NTI2 1148 aa22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 AATFQ9NY61 560 aaKnown RBP eCLIP22.88■■□□□ 1.25
PCDHB11-202ENST00000624887 CYP2D7A0A087X1C5 515 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 KINO60870 393 aaKnown RBP22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 FANCBQ8NB91 859 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 ZKSCAN5Q9Y2L8 839 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 USP17L12C9JPN9 530 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 USP17L21D6R901 530 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 PPP2R5BQ15173 497 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 C15orf52Q6ZUT6 534 aaKnown RBP22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 NBPF11Q86T75 865 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 TRIM22Q8IYM9 498 aa22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 RPGRQ92834 1020 aaKnown RBP22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 ZSCAN10Q96SZ4 725 aaPredicted RBP22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 DCP1AQ9NPI6 582 aaPredicted RBP22.87■■□□□ 1.25
PCDHB11-202ENST00000624887 LAMB1P07942 1786 aa22.86■■□□□ 1.25
PCDHB11-202ENST00000624887 ST5P78524 1137 aa22.86■■□□□ 1.25
PCDHB11-202ENST00000624887 FMR1NBQ8N0W7 255 aaPredicted RBP22.86■■□□□ 1.25
PCDHB11-202ENST00000624887 TDRD7Q8NHU6 1098 aaKnown RBP22.86■■□□□ 1.25
PCDHB11-202ENST00000624887 WDR66Q8TBY9 1149 aa22.86■■□□□ 1.25
PCDHB11-202ENST00000624887 CAVIN2O95810 425 aa22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 SERPINB2P05120 415 aa22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 PTMAP06454 111 aaKnown RBP22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 DZIP1Q86YF9 867 aaKnown RBP22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 CRACR2BQ8N4Y2 399 aaPredicted RBP22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 ENAHQ8N8S7 591 aaPredicted RBP22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 CBX8Q9HC52 389 aa22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 UBE2Q2LH0YL09 131 aa22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 GNL2Q13823 731 aaKnown RBP22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 SLC39A14Q15043 492 aa22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 SLC51AQ86UW1 340 aa22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.85■■□□□ 1.25
PCDHB11-202ENST00000624887 DLEC1Q9Y238 1755 aa22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 ORC4O43929 436 aa22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 DEXIO95424 95 aa22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 SBK1Q52WX2 424 aa22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 IQCA1Q86XH1 822 aa22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 NUP133Q8WUM0 1156 aa22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 JAG2Q9Y219 1238 aa22.84■■□□□ 1.25
PCDHB11-202ENST00000624887 AP5Z1O43299 807 aa22.83■■□□□ 1.25
PCDHB11-202ENST00000624887 GUCY1A2P33402 732 aa22.83■■□□□ 1.25
PCDHB11-202ENST00000624887 ZNF804AQ7Z570 1209 aa22.83■■□□□ 1.25
PCDHB11-202ENST00000624887 LUZP1Q86V48 1076 aa22.83■■□□□ 1.25
PCDHB11-202ENST00000624887 ARPP21Q9UBL0 812 aaPredicted RBP22.83■■□□□ 1.25
PCDHB11-202ENST00000624887 AXDND1Q5T1B0 1012 aaPredicted RBP22.83■■□□□ 1.24
PCDHB11-202ENST00000624887 A0A1B0GVL5 298 aa22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 PRDM1O75626 825 aa22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 MMP1P03956 469 aa22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 LDHBP07195 334 aaKnown RBP22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 NDUFA8P51970 172 aa22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 IFIT1BQ5T764 474 aaKnown RBP22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 AKT1S1Q96B36 256 aa22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 RBM17Q96I25 401 aaKnown RBP22.82■■□□□ 1.24
PCDHB11-202ENST00000624887 ZNF500O60304 480 aaPredicted RBP22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 PPP6R2O75170 966 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 SLC3A2P08195 630 aaKnown RBP22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 ZNF165P49910 485 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 GPSM2P81274 684 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 ZNF827Q17R98 1081 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 DNAJC25Q9H1X3 360 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 CMA1P23946 247 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 PLCB2Q00722 1185 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 PTPAQ15257 358 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 SAFBQ15424 915 aaKnown RBP eCLIP22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 CATIPQ7Z7H3 387 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 MAP3K14Q99558 947 aa22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 RNF26Q9BY78 433 aaPredicted RBP22.81■■□□□ 1.24
PCDHB11-202ENST00000624887 ATP2B4P23634 1241 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 STX1AQ16623 288 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 NOSTRINQ8IVI9 506 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 CMTR1Q8N1G2 835 aaKnown RBP22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 CCDC82Q8N4S0 544 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 JMYQ8N9B5 988 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 TAOK2Q9UL54 1235 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 TNS1Q9HBL0 1735 aaKnown RBP22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 CALM1P0DP23 149 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 CALM2P0DP24 149 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 CALM3P0DP25 149 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 GSTO1P78417 241 aa22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 FOXP1Q9H334 677 aaPredicted RBP22.8■■□□□ 1.24
PCDHB11-202ENST00000624887 MYH6P13533 1939 aa22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 WDHD1O75717 1129 aaPredicted RBP22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 BBOX1O75936 387 aa22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 HOXA10P31260 410 aaPredicted RBP22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 EVX2Q03828 476 aa22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 DDR1Q08345 913 aa22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 RBM28Q9NW13 759 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms