RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PPEF1O14829 653 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 GTF2F1P35269 517 aaKnown RBP eCLIP10.98□□□□□ -0.653e-8■■■■■ 161.7
CLTCL1-211ENST00000621271 DALRD3Q5D0E6 543 aaKnown RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 GIMAP6Q6P9H5 292 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 G2E3Q7L622 706 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 HAUS7Q99871 368 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 CCDC77Q9BR77 488 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 ARPP21Q9UBL0 812 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 TRAF5O00463 557 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 ALAS1P13196 640 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 TXKP42681 527 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 RAPGEF1Q13905 1077 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 KCTD2Q14681 263 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 ARHGEF16Q5VV41 709 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 MAATS1Q7Z4T9 603 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 CCDC155Q8N6L0 562 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 TIGD1Q96MW7 591 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 FAM169AQ9Y6X4 670 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 A0A1W2PRG0 241 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 POTEB2H3BUK9 544 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 CCDC175P0C221 793 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 TFAP4Q01664 338 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 PIK3AP1Q6ZUJ8 805 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 PALM3A6NDB9 673 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 PPP1R2P41236 205 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 RILPL1Q5EBL4 403 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 MAEAQ7L5Y9 396 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 KRT25Q7Z3Z0 450 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 SAMD9LQ8IVG5 1584 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 DAPK3O43293 454 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 UNC5CLQ8IV45 518 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 FAM200AQ8TCP9 573 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 CCDC42Q96M95 316 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 CARD10Q9BWT7 1032 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 SERPINB2P05120 415 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 PTGS1P23219 599 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 FAM182BQ5T319 152 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 OTUD6AQ7L8S5 288 aa10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 ANGEL1Q9UNK9 670 aaKnown RBP10.97□□□□□ -0.65
CLTCL1-211ENST00000621271 TACC1O75410 805 aa10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 CRKLP46109 303 aaKnown RBP10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 FLOT1O75955 427 aa10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 OSBPP22059 807 aa10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 RUFY3Q7L099 469 aa10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 SUCLG2Q96I99 432 aa10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 DNM3Q9UQ16 869 aa10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 ZNF532Q9HCE3 1301 aa10.96□□□□□ -0.65
CLTCL1-211ENST00000621271 PTPRMP28827 1452 aa10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 KRT19P08727 400 aa10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 PPP2R5BQ15173 497 aa10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 CERKLQ49MI3 558 aaPredicted RBP10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 CCDC93Q567U6 631 aa10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 DNMT1P26358 1616 aaKnown RBP10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 ADGRL2O95490 1459 aa10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 RLBP1P12271 317 aa10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 GNG11P61952 73 aa10.96□□□□□ -0.66
CLTCL1-211ENST00000621271 PDE4DQ08499 809 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 HAUS2Q9NVX0 235 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 CALUO43852 315 aaPredicted RBP10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 SH3BP5O60239 455 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 ZAP70P43403 619 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 MCF2L2Q86YR7 1114 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 MBD5Q9P267 1494 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 KDM5DQ9BY66 1539 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 KDM4FA0A1W2PPD8 638 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 F13A1P00488 732 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 EIF4A1P60842 406 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 KRT83P78385 493 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 UBXN1Q04323 297 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 CCDC186Q7Z3E2 898 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 CEP112Q8N8E3 955 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 NSMCE1Q8WV22 266 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 TRERF1Q96PN7 1200 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 LRWD1Q9UFC0 647 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 CNPY2Q9Y2B0 182 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 MRPL11Q9Y3B7 192 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 AK2P54819 239 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 STX17P56962 302 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 KIF5AQ12840 1032 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 CCDC63Q8NA47 563 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 KBTBD3Q8NAB2 608 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 FAM107BQ9H098 131 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 ODF2LQ9ULJ1 636 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 USP19O94966 1318 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 XDHP47989 1333 aa10.95□□□□□ -0.66
CLTCL1-211ENST00000621271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CHL1O00533 1208 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms