RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 ZBED4O75132 1171 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 FLOT1O75955 427 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 KRT13P13646 458 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 R3HDM1Q15032 1099 aaKnown RBP11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 ADCK5Q3MIX3 580 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 DALRD3Q5D0E6 543 aaKnown RBP11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 BRAPQ7Z569 592 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 MYO6Q9UM54 1294 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 LEMD3Q9Y2U8 911 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 AOX1Q06278 1338 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 CDR1P51861 262 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 PYM1Q9BRP8 204 aaKnown RBP11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 DSCC1Q9BVC3 393 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 TBC1D7Q9P0N9 293 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 MRVI1Q9Y6F6 885 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 ALKQ9UM73 1620 aa11.48□□□□□ -0.57
SMARCA1-205ENST00000617310 JCADQ9P266 1359 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 ANKRD62A6NC57 917 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 KLRF2D3W0D1 207 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 TXLNBQ8N3L3 684 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 LRRC27Q9C0I9 530 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 RMND1Q9NWS8 449 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 NARFQ9UHQ1 456 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 FAM196BA6NMK8 535 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 PRDX5P30044 214 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 CCDC93Q567U6 631 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 RILPL1Q5EBL4 403 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 TTC38Q5R3I4 469 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 DYNLL2Q96FJ2 89 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 INTS4Q96HW7 963 aaKnown RBP11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 TET3O43151 1660 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 TMEM232C9JQI7 657 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 CHRNA5P30532 468 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 ADCY7P51828 1080 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 CEP135Q66GS9 1140 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 REXO1Q8N1G1 1221 aaKnown RBP11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 LCORLQ8N3X6 602 aa11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 PUS7LQ9H0K6 701 aaKnown RBP11.47□□□□□ -0.57
SMARCA1-205ENST00000617310 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 KIF5CO60282 957 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 NONOQ15233 471 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 TRMT2AQ8IZ69 625 aaKnown RBP11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 OSBP2Q969R2 916 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 RIMBP3CA6NJZ7 1639 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 RIMBP3BA6NNM3 1639 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 RIMBP3Q9UFD9 1639 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 CDK12Q9NYV4 1490 aaPredicted RBP11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 GJC1P36383 396 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 CETN2P41208 172 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 UBXN2AP68543 259 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 TYRO3Q06418 890 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 GRAPQ13588 217 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 NFIXQ14938 502 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 GRAPLQ8TC17 118 aaPredicted RBP11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 SNX29Q8TEQ0 813 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 SYNCQ9H7C4 482 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 UNC13BO14795 1591 aa11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.57
SMARCA1-205ENST00000617310 CYP21A2P08686 494 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 CTNNA2P26232 953 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 MAP3K9P80192 1104 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 ZSCAN30Q86W11 494 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 UBXN4Q92575 508 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 ERLIN2O94905 339 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 SLC16A2P36021 539 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 TBC1D10BQ4KMP7 808 aaPredicted RBP11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 TEX35Q5T0J7 233 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 SLFN13Q68D06 897 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 ZBTB9Q96C00 473 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 LRWD1Q9UFC0 647 aa11.46□□□□□ -0.58
SMARCA1-205ENST00000617310 KIF24Q5T7B8 1368 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 TRAF5O00463 557 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 CCDC186Q7Z3E2 898 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 FAM200AQ8TCP9 573 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 CNGA1P29973 690 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 DCAF15Q66K64 600 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 LUZP1Q86V48 1076 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 FAM114A1Q8IWE2 563 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 FANCBQ8NB91 859 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 HOOK2Q96ED9 719 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms