RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 FANCBQ8NB91 859 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 TNKSO95271 1327 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 LRRC37AA6NMS7 1700 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 ORC4O43929 436 aa18.24■□□□□ 0.51
NR1H3-235ENST00000616973 KINO60870 393 aaKnown RBP18.24■□□□□ 0.51
NR1H3-235ENST00000616973 SF3A1Q15459 793 aaKnown RBP18.24■□□□□ 0.51
NR1H3-235ENST00000616973 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
NR1H3-235ENST00000616973 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
NR1H3-235ENST00000616973 DCP1AQ9NPI6 582 aaPredicted RBP18.24■□□□□ 0.51
NR1H3-235ENST00000616973 ZKSCAN5Q9Y2L8 839 aa18.24■□□□□ 0.51
NR1H3-235ENST00000616973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
NR1H3-235ENST00000616973 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 USP17L21D6R901 530 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 SERPINB2P05120 415 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 NT5C2P49902 561 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 SLC39A14Q15043 492 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 ANO6Q4KMQ2 910 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 FMR1NBQ8N0W7 255 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-235ENST00000616973 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-235ENST00000616973 ARPP21Q9UBL0 812 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-235ENST00000616973 CDK5RAP2Q96SN8 1893 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 DEXIO95424 95 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 PRKCSHP14314 528 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-235ENST00000616973 KRT27Q7Z3Y8 459 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 ZNF804AQ7Z570 1209 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 STK11IPQ8N1F8 1099 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.23■□□□□ 0.51
NR1H3-235ENST00000616973 AATFQ9NY61 560 aaKnown RBP eCLIP18.23■□□□□ 0.51
NR1H3-235ENST00000616973 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.23■□□□□ 0.51
NR1H3-235ENST00000616973 NAV1Q8NEY1 1877 aa18.23■□□□□ 0.51
NR1H3-235ENST00000616973 ZNF500O60304 480 aaPredicted RBP18.22■□□□□ 0.51
NR1H3-235ENST00000616973 PPP6R2O75170 966 aa18.22■□□□□ 0.51
NR1H3-235ENST00000616973 DZIP1Q86YF9 867 aaKnown RBP18.22■□□□□ 0.51
NR1H3-235ENST00000616973 ENAHQ8N8S7 591 aaPredicted RBP18.22■□□□□ 0.51
NR1H3-235ENST00000616973 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
NR1H3-235ENST00000616973 CBX8Q9HC52 389 aa18.22■□□□□ 0.51
NR1H3-235ENST00000616973 LTBP1Q14766 1721 aa18.22■□□□□ 0.51
NR1H3-235ENST00000616973 CYP2D7A0A087X1C5 515 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 SMIM22K7EJ46 135 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 SLC3A2P08195 630 aaKnown RBP18.21■□□□□ 0.51
NR1H3-235ENST00000616973 CALM1P0DP23 149 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 CALM2P0DP24 149 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 CALM3P0DP25 149 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 MMP1P03956 469 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 PTMAP06454 111 aaKnown RBP18.21■□□□□ 0.51
NR1H3-235ENST00000616973 LDHBP07195 334 aaKnown RBP18.21■□□□□ 0.51
NR1H3-235ENST00000616973 HOXA10P31260 410 aaPredicted RBP18.21■□□□□ 0.51
NR1H3-235ENST00000616973 GSTO1P78417 241 aa18.21■□□□□ 0.51
NR1H3-235ENST00000616973 GNL2Q13823 731 aaKnown RBP18.21■□□□□ 0.51
NR1H3-235ENST00000616973 AXDND1Q5T1B0 1012 aaPredicted RBP18.21■□□□□ 0.51
NR1H3-235ENST00000616973 RNF26Q9BY78 433 aaPredicted RBP18.21■□□□□ 0.51
NR1H3-235ENST00000616973 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
NR1H3-235ENST00000616973 BBOX1O75936 387 aa18.2■□□□□ 0.5
NR1H3-235ENST00000616973 CMA1P23946 247 aa18.2■□□□□ 0.5
NR1H3-235ENST00000616973 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
NR1H3-235ENST00000616973 JMYQ8N9B5 988 aa18.2■□□□□ 0.5
NR1H3-235ENST00000616973 MAP3K14Q99558 947 aa18.2■□□□□ 0.5
NR1H3-235ENST00000616973 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
NR1H3-235ENST00000616973 RBM28Q9NW13 759 aaKnown RBP18.2■□□□□ 0.5
NR1H3-235ENST00000616973 ANKRD31Q8N7Z5 1873 aa18.2■□□□□ 0.5
NR1H3-235ENST00000616973 KLRG2A4D1S0 409 aaPredicted RBP18.19■□□□□ 0.5
NR1H3-235ENST00000616973 DDAH1O94760 285 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 PPP4CP60510 307 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 GPSM2P81274 684 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 PTPAQ15257 358 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
NR1H3-235ENST00000616973 STX1AQ16623 288 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 NUP133Q8WUM0 1156 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.19■□□□□ 0.5
NR1H3-235ENST00000616973 AP5Z1O43299 807 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 GUCY1A2P33402 732 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 ZNF165P49910 485 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 CRAMP1Q96RY5 1269 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
NR1H3-235ENST00000616973 MKRN1Q9UHC7 482 aaKnown RBP18.19■□□□□ 0.5
NR1H3-235ENST00000616973 FAM237AA0A1B0GTK4 181 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 A0A1B0GVL5 298 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 UBE2Q2LH0YL09 131 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 TRIM37O94972 964 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 LDHCP07864 332 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 NDUFA8P51970 172 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 PDE4BQ07343 736 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 LUZP1Q86V48 1076 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 CERS3Q8IU89 383 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 NOSTRINQ8IVI9 506 aa18.18■□□□□ 0.5
NR1H3-235ENST00000616973 POLRMTO00411 1230 aaKnown RBP18.17■□□□□ 0.5
NR1H3-235ENST00000616973 IL1R1P14778 569 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 DDR1Q08345 913 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 TMC4Q7Z404 712 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 DNAJC25Q9H1X3 360 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
NR1H3-235ENST00000616973 PRDM1O75626 825 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 FUT2Q10981 343 aa18.17■□□□□ 0.5
NR1H3-235ENST00000616973 TROAPQ12815 778 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms