RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 EDC3Q96F86 508 aaKnown RBP10.19□□□□□ -0.78
VPS11-206ENST00000614944 ANKIB1Q9P2G1 1089 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 GYG1P46976 350 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 MYBPC2Q14324 1141 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 OSBP2Q969R2 916 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 IRAK4Q9NWZ3 460 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 POLLQ9UGP5 575 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 LTBP3Q9NS15 1303 aa10.19□□□□□ -0.78
VPS11-206ENST00000614944 GOLGA6CA6NDK9 693 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 GOLGA6BA6NDN3 693 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 GOLGA6DP0CG33 693 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 KCNA3P22001 575 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 PSMA5P28066 241 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 GSTO1P78417 241 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 PTH1RQ03431 593 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 JAKMIP3Q5VZ66 844 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 ZNF589Q86UQ0 364 aaPredicted RBP10.18□□□□□ -0.78
VPS11-206ENST00000614944 RTKN2Q8IZC4 609 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 CD209Q9NNX6 404 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 GOLGA6AQ9NYA3 693 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 RBM8AQ9Y5S9 174 aaKnown RBP10.18□□□□□ -0.78
VPS11-206ENST00000614944 ANKRD33BA6NCL7 494 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 M0R2C6 588 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 UFL1O94874 794 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 CREB3L3Q68CJ9 461 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 PRPF40BQ6NWY9 871 aaKnown RBP10.18□□□□□ -0.78
VPS11-206ENST00000614944 KIF18AQ8NI77 898 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 MTA3Q9BTC8 594 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 NAV1Q8NEY1 1877 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 SLC27A2O14975 620 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 CTIFO43310 598 aaKnown RBP10.18□□□□□ -0.78
VPS11-206ENST00000614944 ST18O60284 1047 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 HSPD1P10809 573 aaKnown RBP10.18□□□□□ -0.78
VPS11-206ENST00000614944 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
VPS11-206ENST00000614944 PPP4CP60510 307 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 SLC9C2Q5TAH2 1124 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 VPS37DQ86XT2 251 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 CCDC24Q8N4L8 307 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 ZNF446Q9NWS9 450 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 ZNF532Q9HCE3 1301 aa10.18□□□□□ -0.78
VPS11-206ENST00000614944 PCP11498 1178 aaKnown RBP10.17□□□□□ -0.78
VPS11-206ENST00000614944 MSL1Q68DK7 614 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 MCTP2Q6DN12 878 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 PODNQ7Z5L7 613 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
VPS11-206ENST00000614944 TTC14Q96N46 770 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 STRBPQ96SI9 672 aaKnown RBP10.17□□□□□ -0.78
VPS11-206ENST00000614944 CWC15Q9P013 229 aaKnown RBP10.17□□□□□ -0.78
VPS11-206ENST00000614944 FOXP2O15409 715 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 VPS53Q5VIR6 699 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 KLHL23Q8NBE8 558 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 PIBF1Q8WXW3 757 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 NSUN4Q96CB9 384 aaKnown RBP10.17□□□□□ -0.78
VPS11-206ENST00000614944 MYH2Q9UKX2 1941 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 INHBEP58166 350 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 SYCP1Q15431 976 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 UVSSAQ2YD98 709 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 DPP8Q6V1X1 898 aaPredicted RBP10.17□□□□□ -0.78
VPS11-206ENST00000614944 TTLL6Q8N841 843 aa10.17□□□□□ -0.78
VPS11-206ENST00000614944 COL2A1P02458 1487 aaPredicted RBP10.16□□□□□ -0.78
VPS11-206ENST00000614944 GPAA1O43292 621 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 KLRK1P26718 216 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 HDLBPQ00341 1268 aaKnown RBP10.16□□□□□ -0.78
VPS11-206ENST00000614944 PI16Q6UXB8 463 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 HSCBQ8IWL3 235 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 SUGP1Q8IWZ8 645 aaKnown RBP10.16□□□□□ -0.78
VPS11-206ENST00000614944 TXLNBQ8N3L3 684 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 WWC3Q9ULE0 1092 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 DICER1Q9UPY3 1922 aaKnown RBP10.16□□□□□ -0.78
VPS11-206ENST00000614944 GAKO14976 1311 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 LDHCP07864 332 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 CCDC93Q567U6 631 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 TXNRD3Q86VQ6 643 aa10.16□□□□□ -0.78
VPS11-206ENST00000614944 RIOK1Q9BRS2 568 aaKnown RBP10.16□□□□□ -0.78
VPS11-206ENST00000614944 PUS7LQ9H0K6 701 aaKnown RBP10.16□□□□□ -0.78
VPS11-206ENST00000614944 NSFL1CQ9UNZ2 370 aaKnown RBP10.16□□□□□ -0.78
VPS11-206ENST00000614944 K7ELQ4 463 aaPredicted RBP10.15□□□□□ -0.78
VPS11-206ENST00000614944 RIOK3O14730 519 aaKnown RBP10.15□□□□□ -0.78
VPS11-206ENST00000614944 ABCD1P33897 745 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 PTGER2P43116 358 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 IRX1P78414 480 aaPredicted RBP10.15□□□□□ -0.78
VPS11-206ENST00000614944 TTC19Q6DKK2 380 aaPredicted RBP10.15□□□□□ -0.78
VPS11-206ENST00000614944 AGXT2Q9BYV1 514 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 PALD1Q9ULE6 856 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 SNAP23O00161 211 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 DDIT3P35638 169 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 ANKRD1Q15327 319 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 ATL2Q8NHH9 583 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 CEP89Q96ST8 783 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 ROBO3Q96MS0 1386 aa10.15□□□□□ -0.78
VPS11-206ENST00000614944 NEFHP12036 1026 aa10.15□□□□□ -0.79
VPS11-206ENST00000614944 CUL4AQ13619 759 aa10.15□□□□□ -0.79
VPS11-206ENST00000614944 RUFY3Q7L099 469 aa10.15□□□□□ -0.79
VPS11-206ENST00000614944 MAGEB6Q8N7X4 407 aa10.15□□□□□ -0.79
VPS11-206ENST00000614944 INTS4Q96HW7 963 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms