RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 MRE11P49959 708 aa4□□□□□ -1.77
LIG4-205ENST00000614526 EIF6P56537 245 aaKnown RBP4□□□□□ -1.77
LIG4-205ENST00000614526 TFAP4Q01664 338 aa4□□□□□ -1.77
LIG4-205ENST00000614526 TCP10Q12799 353 aa4□□□□□ -1.77
LIG4-205ENST00000614526 CPLX2Q6PUV4 134 aaKnown RBP4□□□□□ -1.77
LIG4-205ENST00000614526 ILDR1Q86SU0 546 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 SP8Q8IXZ3 490 aa4□□□□□ -1.77
LIG4-205ENST00000614526 ZNF654Q8IZM8 581 aa4□□□□□ -1.77
LIG4-205ENST00000614526 CERS5Q8N5B7 392 aa4□□□□□ -1.77
LIG4-205ENST00000614526 MASTLQ96GX5 879 aa4□□□□□ -1.77
LIG4-205ENST00000614526 PGBD1Q96JS3 809 aa4□□□□□ -1.77
LIG4-205ENST00000614526 CAMKK2Q96RR4 588 aa4□□□□□ -1.77
LIG4-205ENST00000614526 ZSCAN10Q96SZ4 725 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 CPVLQ9H3G5 476 aa4□□□□□ -1.77
LIG4-205ENST00000614526 DACT1Q9NYF0 836 aa4□□□□□ -1.77
LIG4-205ENST00000614526 STX8Q9UNK0 236 aa4□□□□□ -1.77
LIG4-205ENST00000614526 ATF5Q9Y2D1 282 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 CLIC4Q9Y696 253 aa4□□□□□ -1.77
LIG4-205ENST00000614526 LY75O60449 1722 aa4□□□□□ -1.77
LIG4-205ENST00000614526 C4AP0C0L4 1744 aa4□□□□□ -1.77
LIG4-205ENST00000614526 ZMYM6O95789 1325 aa4□□□□□ -1.77
LIG4-205ENST00000614526 FAM196BA6NMK8 535 aa4□□□□□ -1.77
LIG4-205ENST00000614526 RAD21O60216 631 aa4□□□□□ -1.77
LIG4-205ENST00000614526 PLEKHA8P1O95397 391 aa4□□□□□ -1.77
LIG4-205ENST00000614526 BAG3O95817 575 aa4□□□□□ -1.77
LIG4-205ENST00000614526 VEGFAP15692 232 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 ALDH1B1P30837 517 aa4□□□□□ -1.77
LIG4-205ENST00000614526 NASPP49321 788 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 EVCP57679 992 aa4□□□□□ -1.77
LIG4-205ENST00000614526 SSRP1Q08945 709 aaKnown RBP4□□□□□ -1.77
LIG4-205ENST00000614526 SF3A1Q15459 793 aaKnown RBP4□□□□□ -1.77
LIG4-205ENST00000614526 KRT40Q6A162 431 aa4□□□□□ -1.77
LIG4-205ENST00000614526 IQCA1Q86XH1 822 aa4□□□□□ -1.77
LIG4-205ENST00000614526 FANCBQ8NB91 859 aa4□□□□□ -1.77
LIG4-205ENST00000614526 FBXO18Q8NFZ0 1043 aa4□□□□□ -1.77
LIG4-205ENST00000614526 KIF3AQ9Y496 699 aa4□□□□□ -1.77
LIG4-205ENST00000614526 V9GY48 417 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 CICQ96RK0 1608 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 SALL1Q9NSC2 1324 aa4□□□□□ -1.77
LIG4-205ENST00000614526 BTBD18B2RXH4 712 aa4□□□□□ -1.77
LIG4-205ENST00000614526 NR1I2O75469 434 aa4□□□□□ -1.77
LIG4-205ENST00000614526 GOLGA8HP0CJ92 632 aa4□□□□□ -1.77
LIG4-205ENST00000614526 NTRK3Q16288 839 aa4□□□□□ -1.77
LIG4-205ENST00000614526 AOC3Q16853 763 aa4□□□□□ -1.77
LIG4-205ENST00000614526 CLEC10AQ8IUN9 316 aa4□□□□□ -1.77
LIG4-205ENST00000614526 FLAD1Q8NFF5 587 aa4□□□□□ -1.77
LIG4-205ENST00000614526 RTFDC1Q9BY42 306 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 ISY1Q9ULR0 285 aaKnown RBP4□□□□□ -1.77
LIG4-205ENST00000614526 SCAF8Q9UPN6 1271 aaKnown RBP4□□□□□ -1.77
LIG4-205ENST00000614526 LAMB2P55268 1798 aa4□□□□□ -1.77
LIG4-205ENST00000614526 LAMA4Q16363 1823 aa4□□□□□ -1.77
LIG4-205ENST00000614526 BAZ2AQ9UIF9 1905 aaKnown RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 MYH13Q9UKX3 1938 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 A0A1B0GVL5 298 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 LDHCP07864 332 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 IL1R1P14778 569 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 LIFRP42702 1097 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 ATP2B2Q01814 1243 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 PDE4BQ07343 736 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 NR5A1Q13285 461 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 TRIM29Q14134 588 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 STK38Q15208 465 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 SPECC1Q5M775 1068 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 LRSAM1Q6UWE0 723 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 CATIPQ7Z7H3 387 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 SGMS1Q86VZ5 419 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 ZNF444Q8N0Y2 327 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 OXER1Q8TDS5 423 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 SCAND2PQ9GZW5 306 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 ZSCAN16Q9H4T2 348 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 ATP8A2Q9NTI2 1148 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 VPS54Q9P1Q0 977 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 UBR3Q6ZT12 1888 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 MROH7-TTC4A0A0A0MT08 1334 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 KLRG2A4D1S0 409 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 TSPY3P0CV98 308 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 TSPY8P0CW00 308 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 ZNF445P59923 1031 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 GSTO1P78417 241 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 AKAP17AQ02040 695 aaKnown RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 SEC23AQ15436 765 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 CCDC183Q5T5S1 534 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 C12orf60Q5U649 245 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 NBPF11Q86T75 865 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 CCAR1Q8IX12 1150 aaKnown RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 SYAP1Q96A49 352 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 VAT1LQ9HCJ6 419 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 USP40Q9NVE5 1235 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 PODXL2Q9NZ53 605 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 CFAP45Q9UL16 551 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 DAGLAQ9Y4D2 1042 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 MYH7P12883 1935 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 FAM205CA6NFA0 338 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 CDKL5O76039 1030 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 SLC3A2P08195 630 aaKnown RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 BAG6P46379 1132 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 KIF23Q02241 960 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 NFIAQ12857 509 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 CSPP1Q1MSJ5 1256 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 NOM1Q5C9Z4 860 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms