RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 OVOS2A0A0G2JMS6 1433 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 A0A087WUV0 522 aaPredicted RBP18.86■□□□□ 0.61
TSKU-205ENST00000612930 TUBBP07437 444 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 E2F4Q16254 413 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 MMS22LQ6ZRQ5 1243 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 PPFIBP1Q86W92 1011 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 TICAM2Q86XR7 235 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 DACH1Q9UI36 760 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 C5P01031 1676 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 MFAP3LO75121 409 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 NCAPH2Q6IBW4 605 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 STK11IPQ8N1F8 1099 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 VIPAS39Q9H9C1 493 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 ZC3H4Q9UPT8 1303 aaKnown RBP18.85■□□□□ 0.61
TSKU-205ENST00000612930 AFDNP55196 1824 aaKnown RBP18.85■□□□□ 0.61
TSKU-205ENST00000612930 IFIT1P09914 478 aaKnown RBP18.85■□□□□ 0.61
TSKU-205ENST00000612930 AMPD2Q01433 879 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 KRI1Q8N9T8 703 aaKnown RBP18.85■□□□□ 0.61
TSKU-205ENST00000612930 NCOA7Q8NI08 942 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 PHKBQ93100 1093 aa18.85■□□□□ 0.61
TSKU-205ENST00000612930 HOOK1Q9UJC3 728 aaKnown RBP18.85■□□□□ 0.61
TSKU-205ENST00000612930 ECM29Q5VYK3 1845 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 RXRAP19793 462 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 ARHGAP25P42331 645 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 SLC39A6Q13433 755 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 NKX2-3Q8TAU0 364 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 ZMYM6O95789 1325 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 CPDO75976 1380 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 POLR2DO15514 142 aaKnown RBP18.84■□□□□ 0.61
TSKU-205ENST00000612930 CASP14P31944 242 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 PLCD1P51178 756 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 SKIDA1Q1XH10 827 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 MICALL1Q8N3F8 863 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 DENND2AQ9ULE3 1009 aa18.84■□□□□ 0.61
TSKU-205ENST00000612930 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
TSKU-205ENST00000612930 CASP7P55210 303 aa18.83■□□□□ 0.61
TSKU-205ENST00000612930 SWT1Q5T5J6 900 aaKnown RBP18.83■□□□□ 0.61
TSKU-205ENST00000612930 MCTP2Q6DN12 878 aa18.83■□□□□ 0.61
TSKU-205ENST00000612930 RIN2Q8WYP3 895 aaPredicted RBP18.83■□□□□ 0.61
TSKU-205ENST00000612930 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.61
TSKU-205ENST00000612930 HPCAL4Q9UM19 191 aa18.83■□□□□ 0.61
TSKU-205ENST00000612930 MYO6Q9UM54 1294 aa18.83■□□□□ 0.61
TSKU-205ENST00000612930 MYH8P13535 1937 aa18.83■□□□□ 0.61
TSKU-205ENST00000612930 NFAT5O94916 1531 aa18.83■□□□□ 0.6
TSKU-205ENST00000612930 A0A087WZG4 1122 aa18.83■□□□□ 0.6
TSKU-205ENST00000612930 ATP5J2-PTCD1G3V325 749 aa18.83■□□□□ 0.6
TSKU-205ENST00000612930 PTCD1O75127 700 aaKnown RBP18.83■□□□□ 0.6
TSKU-205ENST00000612930 FECHP22830 423 aa18.83■□□□□ 0.6
TSKU-205ENST00000612930 PIP4K2AP48426 406 aaPredicted RBP18.83■□□□□ 0.6
TSKU-205ENST00000612930 FXR1P51114 621 aaKnown RBP eCLIP18.83■□□□□ 0.6
TSKU-205ENST00000612930 KAT2BQ92831 832 aa18.83■□□□□ 0.6
TSKU-205ENST00000612930 MAP3K15Q6ZN16 1313 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 CDHR2Q9BYE9 1310 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 EXOC5O00471 708 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
TSKU-205ENST00000612930 LRP10Q7Z4F1 713 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 RALYLQ86SE5 291 aaKnown RBP18.82■□□□□ 0.6
TSKU-205ENST00000612930 TRIML1Q8N9V2 468 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 CTCFLQ8NI51 663 aaPredicted RBP18.82■□□□□ 0.6
TSKU-205ENST00000612930 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 GYPCP04921 128 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 ERCC5P28715 1186 aaPredicted RBP18.82■□□□□ 0.6
TSKU-205ENST00000612930 ERVK-24P63145 666 aa18.82■□□□□ 0.6
TSKU-205ENST00000612930 METAP2P50579 478 aaKnown RBP eCLIP18.81■□□□□ 0.6
TSKU-205ENST00000612930 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
TSKU-205ENST00000612930 ESF1Q9H501 851 aaKnown RBP18.81■□□□□ 0.6
TSKU-205ENST00000612930 GPR108Q9NPR9 543 aa18.81■□□□□ 0.6
TSKU-205ENST00000612930 FBXO2Q9UK22 296 aaPredicted RBP18.81■□□□□ 0.6
TSKU-205ENST00000612930 USP14P54578 494 aa18.81■□□□□ 0.6
TSKU-205ENST00000612930 GPATCH11Q8N954 259 aa18.81■□□□□ 0.6
TSKU-205ENST00000612930 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
TSKU-205ENST00000612930 SHOX2O60902 331 aaPredicted RBP18.8■□□□□ 0.6
TSKU-205ENST00000612930 TOB1P50616 345 aaPredicted RBP18.8■□□□□ 0.6
TSKU-205ENST00000612930 AKAP17AQ02040 695 aaKnown RBP18.8■□□□□ 0.6
TSKU-205ENST00000612930 HSP90AB3PQ58FF7 597 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 SPATA20Q8TB22 786 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 SENP2Q9HC62 589 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 WWC3Q9ULE0 1092 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 WDR19Q8NEZ3 1342 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 ACTN4O43707 911 aaKnown RBP18.8■□□□□ 0.6
TSKU-205ENST00000612930 CD44P16070 742 aaKnown RBP18.8■□□□□ 0.6
TSKU-205ENST00000612930 MMP14P50281 582 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 STX17P56962 302 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 FOXO4P98177 505 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 TRDNQ13061 729 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 WASHC4Q2M389 1173 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 ZNF790Q6PG37 636 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 CCDC148Q8NFR7 591 aa18.8■□□□□ 0.6
TSKU-205ENST00000612930 SPEF2Q9C093 1822 aa18.79■□□□□ 0.6
TSKU-205ENST00000612930 PTPREP23469 700 aa18.79■□□□□ 0.6
TSKU-205ENST00000612930 NTRK3Q16288 839 aa18.79■□□□□ 0.6
TSKU-205ENST00000612930 SPATA1Q5VX52 437 aa18.79■□□□□ 0.6
TSKU-205ENST00000612930 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.79■□□□□ 0.6
TSKU-205ENST00000612930 CEP89Q96ST8 783 aa18.79■□□□□ 0.6
TSKU-205ENST00000612930 MYO1AQ9UBC5 1043 aa18.79■□□□□ 0.6
TSKU-205ENST00000612930 RANBP6O60518 1105 aaKnown RBP18.79■□□□□ 0.6
TSKU-205ENST00000612930 CDKL5O76039 1030 aa18.79■□□□□ 0.6
TSKU-205ENST00000612930 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms