RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 DNAJC18Q9H819 358 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 SNX14Q9Y5W7 946 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 ZNF784Q8NCA9 323 aaPredicted RBP14.34□□□□□ -0.11
CLK4-215ENST00000611733 KCNB2Q92953 911 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 DHX36Q9H2U1 1008 aaKnown RBP14.34□□□□□ -0.11
CLK4-215ENST00000611733 ANAPC4Q9UJX5 808 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
CLK4-215ENST00000611733 NAV1Q8NEY1 1877 aa14.33□□□□□ -0.11
CLK4-215ENST00000611733 GABPAQ06546 454 aa14.33□□□□□ -0.11
CLK4-215ENST00000611733 TTC6Q86TZ1 520 aa14.33□□□□□ -0.11
CLK4-215ENST00000611733 LDHDQ86WU2 507 aa14.33□□□□□ -0.11
CLK4-215ENST00000611733 PI4KBQ9UBF8 816 aa14.33□□□□□ -0.11
CLK4-215ENST00000611733 MYH1P12882 1939 aa14.33□□□□□ -0.12
CLK4-215ENST00000611733 E7EWF7 191 aa14.33□□□□□ -0.12
CLK4-215ENST00000611733 EPB41L2O43491 1005 aaKnown RBP14.33□□□□□ -0.12
CLK4-215ENST00000611733 RRP1BQ14684 758 aaKnown RBP14.33□□□□□ -0.12
CLK4-215ENST00000611733 CDC37L1Q7L3B6 337 aa14.33□□□□□ -0.12
CLK4-215ENST00000611733 NEDD4P46934 1319 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 CDK8P49336 464 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
CLK4-215ENST00000611733 SERPINB13Q9UIV8 391 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 CPA1P15085 419 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 PRKG1Q13976 671 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 AKNAD1Q5T1N1 836 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 METTL16Q86W50 562 aaKnown RBP14.32□□□□□ -0.12
CLK4-215ENST00000611733 AMOTL1Q8IY63 956 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 CDCA5Q96FF9 252 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 TBC1D32Q96NH3 1257 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 KIF2CQ99661 725 aa14.32□□□□□ -0.12
CLK4-215ENST00000611733 SIPA1L1O43166 1804 aa14.31□□□□□ -0.12
CLK4-215ENST00000611733 SHMT1P34896 483 aa14.31□□□□□ -0.12
CLK4-215ENST00000611733 JAG1P78504 1218 aa14.31□□□□□ -0.12
CLK4-215ENST00000611733 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
CLK4-215ENST00000611733 C16orf86Q6ZW13 317 aa14.31□□□□□ -0.12
CLK4-215ENST00000611733 FOXP4Q8IVH2 680 aaPredicted RBP14.31□□□□□ -0.12
CLK4-215ENST00000611733 CRACR2BQ8N4Y2 399 aaPredicted RBP14.31□□□□□ -0.12
CLK4-215ENST00000611733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLK4-215ENST00000611733 SSC5DA1L4H1 1573 aa14.31□□□□□ -0.12
CLK4-215ENST00000611733 COL2A1P02458 1487 aaPredicted RBP14.3□□□□□ -0.12
CLK4-215ENST00000611733 ITGBL1O95965 494 aaPredicted RBP14.3□□□□□ -0.12
CLK4-215ENST00000611733 RBM25P49756 843 aaKnown RBP14.3□□□□□ -0.12
CLK4-215ENST00000611733 TSGA10IPQ3SY00 556 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 RNF20Q5VTR2 975 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 CHADLQ6NUI6 762 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 STAG1Q8WVM7 1258 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 EHD4Q9H223 541 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLK4-215ENST00000611733 B4E1Z4 1266 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 EIF5BO60841 1220 aaKnown RBP14.3□□□□□ -0.12
CLK4-215ENST00000611733 FGRP09769 529 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 MCCP23508 829 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 MAP3K10Q02779 954 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 FAM47AQ5JRC9 791 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 MOB2Q70IA6 237 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 CHST3Q7LGC8 479 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 UPF2Q9HAU5 1272 aaKnown RBP14.3□□□□□ -0.12
CLK4-215ENST00000611733 TOMM22Q9NS69 142 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 PPP2R3BQ9Y5P8 575 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 ROBO3Q96MS0 1386 aa14.3□□□□□ -0.12
CLK4-215ENST00000611733 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
CLK4-215ENST00000611733 RASA1P20936 1047 aa14.29□□□□□ -0.12
CLK4-215ENST00000611733 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
CLK4-215ENST00000611733 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
CLK4-215ENST00000611733 TCEANC2Q96MN5 208 aa14.29□□□□□ -0.12
CLK4-215ENST00000611733 JAKMIP1Q96N16 626 aaKnown RBP14.29□□□□□ -0.12
CLK4-215ENST00000611733 ZNF408Q9H9D4 720 aa14.29□□□□□ -0.12
CLK4-215ENST00000611733 PHF20L1A8MW92 1017 aa14.28□□□□□ -0.12
CLK4-215ENST00000611733 TBC1D12O60347 775 aa14.28□□□□□ -0.12
CLK4-215ENST00000611733 USP2O75604 605 aaPredicted RBP14.28□□□□□ -0.12
CLK4-215ENST00000611733 AKR1B1P15121 316 aa14.28□□□□□ -0.12
CLK4-215ENST00000611733 PDE4BQ07343 736 aa14.28□□□□□ -0.12
CLK4-215ENST00000611733 TATDN1Q6P1N9 297 aa14.28□□□□□ -0.12
CLK4-215ENST00000611733 ZSWIM5Q9P217 1185 aa14.28□□□□□ -0.12
CLK4-215ENST00000611733 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.28□□□□□ -0.12
CLK4-215ENST00000611733 RANBP6O60518 1105 aaKnown RBP14.27□□□□□ -0.12
CLK4-215ENST00000611733 KDM4AO75164 1064 aa14.27□□□□□ -0.12
CLK4-215ENST00000611733 GDF11O95390 407 aa14.27□□□□□ -0.12
CLK4-215ENST00000611733 SLC3A2P08195 630 aaKnown RBP14.27□□□□□ -0.12
CLK4-215ENST00000611733 SUPT20HL1Q3ZLR7 823 aa14.27□□□□□ -0.12
CLK4-215ENST00000611733 NEK1Q96PY6 1258 aa14.27□□□□□ -0.12
CLK4-215ENST00000611733 TRIM34Q9BYJ4 488 aa14.27□□□□□ -0.12
CLK4-215ENST00000611733 UPF3BQ9BZI7 483 aaKnown RBP14.27□□□□□ -0.12
CLK4-215ENST00000611733 HERC5Q9UII4 1024 aaKnown RBP14.27□□□□□ -0.12
CLK4-215ENST00000611733 LAMB1P07942 1786 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 ORC4O43929 436 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 NMT2O60551 498 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 INPP5BP32019 993 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 ANTXR2P58335 489 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 TFAP4Q01664 338 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 MB21D2Q8IYB1 491 aaPredicted RBP14.27□□□□□ -0.13
CLK4-215ENST00000611733 ZKSCAN3Q9BRR0 538 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.27□□□□□ -0.13
CLK4-215ENST00000611733 LRRC2Q9BYS8 371 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 SWAP70Q9UH65 585 aa14.27□□□□□ -0.13
CLK4-215ENST00000611733 LAMA4Q16363 1823 aa14.26□□□□□ -0.13
CLK4-215ENST00000611733 CASTP20810 708 aaKnown RBP14.26□□□□□ -0.13
CLK4-215ENST00000611733 CERKLQ49MI3 558 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms