RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 PTF1AQ7RTS3 328 aa27.54■■■□□ 2
HOXA4-204ENST00000610970 FANCBQ8NB91 859 aa27.54■■■□□ 2
HOXA4-204ENST00000610970 SDR42E1Q8WUS8 393 aa27.54■■■□□ 2
HOXA4-204ENST00000610970 NSUN4Q96CB9 384 aaKnown RBP27.54■■■□□ 2
HOXA4-204ENST00000610970 SPTY2D1Q68D10 685 aaPredicted RBP27.53■■■□□ 2
HOXA4-204ENST00000610970 CRACR2BQ8N4Y2 399 aaPredicted RBP27.53■■■□□ 2
HOXA4-204ENST00000610970 TRIM5Q9C035 493 aa27.53■■■□□ 2
HOXA4-204ENST00000610970 DUOX1Q9NRD9 1551 aa27.53■■■□□ 2
HOXA4-204ENST00000610970 TM4SF1P30408 202 aa27.53■■■□□ 2
HOXA4-204ENST00000610970 PTPAQ15257 358 aa27.53■■■□□ 2
HOXA4-204ENST00000610970 NBPF11Q86T75 865 aa27.53■■■□□ 2
HOXA4-204ENST00000610970 FOXP1Q9H334 677 aaPredicted RBP27.53■■■□□ 2
HOXA4-204ENST00000610970 KIAA1468Q9P260 1216 aa27.53■■■□□ 2
HOXA4-204ENST00000610970 ZNF202O95125 648 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 MMP1P03956 469 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 CALM1P0DP23 149 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 CALM2P0DP24 149 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 CALM3P0DP25 149 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 ZRSR1Q15695 479 aaKnown RBP27.52■■■□□ 2
HOXA4-204ENST00000610970 MAP3K14Q99558 947 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 BPIFA3Q9BQP9 254 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 CRNKL1Q9BZJ0 848 aaKnown RBP27.52■■■□□ 2
HOXA4-204ENST00000610970 TTC12Q9H892 705 aaPredicted RBP27.52■■■□□ 2
HOXA4-204ENST00000610970 ATP8A2Q9NTI2 1148 aa27.52■■■□□ 2
HOXA4-204ENST00000610970 CUTAO60888 179 aa27.51■■□□□ 1.99
HOXA4-204ENST00000610970 TRAPPC3LQ5T215 181 aa27.51■■□□□ 1.99
HOXA4-204ENST00000610970 FAM182BQ5T319 152 aa27.51■■□□□ 1.99
HOXA4-204ENST00000610970 RNF26Q9BY78 433 aaPredicted RBP27.51■■□□□ 1.99
HOXA4-204ENST00000610970 KIAA1551Q9HCM1 1747 aa27.51■■□□□ 1.99
HOXA4-204ENST00000610970 TNKSO95271 1327 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 BECN2A8MW95 431 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 ADRA2BP18089 450 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 RFC4P35249 363 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 C11orf57Q6ZUT1 292 aaPredicted RBP27.5■■□□□ 1.99
HOXA4-204ENST00000610970 IQCA1Q86XH1 822 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 NOSTRINQ8IVI9 506 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 ZSCAN10Q96SZ4 725 aaPredicted RBP27.5■■□□□ 1.99
HOXA4-204ENST00000610970 ZKSCAN3Q9BRR0 538 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 SPTLC3Q9NUV7 552 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 CCDC88AQ3V6T2 1871 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 DLEC1Q9Y238 1755 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 SBF2Q86WG5 1849 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 WTIPA6NIX2 430 aaPredicted RBP27.5■■□□□ 1.99
HOXA4-204ENST00000610970 SLC3A2P08195 630 aaKnown RBP27.5■■□□□ 1.99
HOXA4-204ENST00000610970 DYNLL1P63167 89 aaKnown RBP27.5■■□□□ 1.99
HOXA4-204ENST00000610970 MECOMQ03112 1051 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 NOLC1Q14978 699 aaKnown RBP eCLIP27.5■■□□□ 1.99
HOXA4-204ENST00000610970 RBM28Q9NW13 759 aaKnown RBP27.5■■□□□ 1.99
HOXA4-204ENST00000610970 LEMD3Q9Y2U8 911 aa27.5■■□□□ 1.99
HOXA4-204ENST00000610970 ORC4O43929 436 aa27.49■■□□□ 1.99
HOXA4-204ENST00000610970 PFKFB1P16118 471 aa27.49■■□□□ 1.99
HOXA4-204ENST00000610970 ZNF384Q8TF68 577 aa27.49■■□□□ 1.99
HOXA4-204ENST00000610970 MRFAP1L1Q96HT8 127 aa27.49■■□□□ 1.99
HOXA4-204ENST00000610970 ZNF830Q96NB3 372 aaPredicted RBP27.49■■□□□ 1.99
HOXA4-204ENST00000610970 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.49■■□□□ 1.99
HOXA4-204ENST00000610970 HPSEQ9Y251 543 aa27.49■■□□□ 1.99
HOXA4-204ENST00000610970 XBP1P17861 261 aa27.48■■□□□ 1.99
HOXA4-204ENST00000610970 SBK1Q52WX2 424 aa27.48■■□□□ 1.99
HOXA4-204ENST00000610970 RILPL1Q5EBL4 403 aa27.48■■□□□ 1.99
HOXA4-204ENST00000610970 CTR9Q6PD62 1173 aa27.48■■□□□ 1.99
HOXA4-204ENST00000610970 ELOA2Q8IYF1 753 aaPredicted RBP27.48■■□□□ 1.99
HOXA4-204ENST00000610970 IRS2Q9Y4H2 1338 aa27.48■■□□□ 1.99
HOXA4-204ENST00000610970 WDHD1O75717 1129 aaPredicted RBP27.47■■□□□ 1.99
HOXA4-204ENST00000610970 CATIPQ7Z7H3 387 aa27.47■■□□□ 1.99
HOXA4-204ENST00000610970 SPC24Q8NBT2 197 aa27.47■■□□□ 1.99
HOXA4-204ENST00000610970 MORC2Q9Y6X9 1032 aaPredicted RBP27.47■■□□□ 1.99
HOXA4-204ENST00000610970 DDAH1O94760 285 aa27.47■■□□□ 1.99
HOXA4-204ENST00000610970 AKAP17AQ02040 695 aaKnown RBP27.47■■□□□ 1.99
HOXA4-204ENST00000610970 RESP18Q5W5W9 173 aa27.47■■□□□ 1.99
HOXA4-204ENST00000610970 ARPP21Q9UBL0 812 aaPredicted RBP27.47■■□□□ 1.99
HOXA4-204ENST00000610970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.47■■□□□ 1.99
HOXA4-204ENST00000610970 LAMB1P07942 1786 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 BRWD3Q6RI45 1802 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 SYKP43405 635 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 GRAPQ13588 217 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 SMIM5Q71RC9 77 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 DHX40Q8IX18 779 aaKnown RBP27.46■■□□□ 1.99
HOXA4-204ENST00000610970 DRC7Q8IY82 874 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 DIS3L2Q8IYB7 885 aaKnown RBP27.46■■□□□ 1.99
HOXA4-204ENST00000610970 GRAPLQ8TC17 118 aaPredicted RBP27.46■■□□□ 1.99
HOXA4-204ENST00000610970 KIAA1524Q8TCG1 905 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 NUP133Q8WUM0 1156 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 EP400Q96L91 3159 aa27.46■■□□□ 1.99
HOXA4-204ENST00000610970 NPHP1O15259 732 aa27.45■■□□□ 1.99
HOXA4-204ENST00000610970 KLRK1P26718 216 aa27.45■■□□□ 1.99
HOXA4-204ENST00000610970 NLRP12P59046 1061 aa27.45■■□□□ 1.99
HOXA4-204ENST00000610970 IFIT1BQ5T764 474 aaKnown RBP27.45■■□□□ 1.99
HOXA4-204ENST00000610970 C15orf52Q6ZUT6 534 aaKnown RBP27.45■■□□□ 1.99
HOXA4-204ENST00000610970 ENAHQ8N8S7 591 aaPredicted RBP27.45■■□□□ 1.99
HOXA4-204ENST00000610970 WDR66Q8TBY9 1149 aa27.45■■□□□ 1.99
HOXA4-204ENST00000610970 NOL10Q9BSC4 688 aaKnown RBP27.45■■□□□ 1.99
HOXA4-204ENST00000610970 BAZ2AQ9UIF9 1905 aaKnown RBP27.44■■□□□ 1.98
HOXA4-204ENST00000610970 PRPF3O43395 683 aaKnown RBP27.44■■□□□ 1.98
HOXA4-204ENST00000610970 MARCKSP29966 332 aaPredicted RBP27.44■■□□□ 1.98
HOXA4-204ENST00000610970 KCNF1Q9H3M0 494 aa27.44■■□□□ 1.98
HOXA4-204ENST00000610970 TFCP2L1Q9NZI6 479 aa27.44■■□□□ 1.98
HOXA4-204ENST00000610970 CEP131Q9UPN4 1083 aa27.44■■□□□ 1.98
HOXA4-204ENST00000610970 R3HCC1Q9Y3T6 440 aaKnown RBP27.44■■□□□ 1.98
HOXA4-204ENST00000610970 USP17L12C9JPN9 530 aa27.44■■□□□ 1.98
HOXA4-204ENST00000610970 USP17L21D6R901 530 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms