RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 CCL15Q16663 113 aa17.37■□□□□ 0.37
PRDM16-210ENST00000607632 OTUD7BQ6GQQ9 843 aa17.37■□□□□ 0.37
PRDM16-210ENST00000607632 R3HDMLQ9H3Y0 253 aa17.37■□□□□ 0.37
PRDM16-210ENST00000607632 DNAJC18Q9H819 358 aa17.37■□□□□ 0.37
PRDM16-210ENST00000607632 CXCL11O14625 94 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 CETPP11597 493 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 PTPRAP18433 802 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 MOGSQ13724 837 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 UBE3CQ15386 1083 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 FOXP4Q8IVH2 680 aaPredicted RBP17.36■□□□□ 0.37
PRDM16-210ENST00000607632 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 GPATCH3Q96I76 525 aa17.36■□□□□ 0.37
PRDM16-210ENST00000607632 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
PRDM16-210ENST00000607632 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
PRDM16-210ENST00000607632 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
PRDM16-210ENST00000607632 MAGEB6P1A0A0J9YX57 407 aa17.35■□□□□ 0.37
PRDM16-210ENST00000607632 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
PRDM16-210ENST00000607632 RRP1BQ14684 758 aaKnown RBP17.35■□□□□ 0.37
PRDM16-210ENST00000607632 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
PRDM16-210ENST00000607632 KBTBD3Q8NAB2 608 aa17.35■□□□□ 0.37
PRDM16-210ENST00000607632 ZNF296Q8WUU4 475 aaPredicted RBP17.35■□□□□ 0.37
PRDM16-210ENST00000607632 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.35■□□□□ 0.37
PRDM16-210ENST00000607632 EHD4Q9H223 541 aa17.35■□□□□ 0.37
PRDM16-210ENST00000607632 AFG3L2Q9Y4W6 797 aa17.35■□□□□ 0.37
PRDM16-210ENST00000607632 CAP2P40123 477 aa17.34■□□□□ 0.37
PRDM16-210ENST00000607632 CRHR2Q13324 411 aa17.34■□□□□ 0.37
PRDM16-210ENST00000607632 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
PRDM16-210ENST00000607632 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
PRDM16-210ENST00000607632 PICK1Q9NRD5 415 aa17.34■□□□□ 0.37
PRDM16-210ENST00000607632 PALD1Q9ULE6 856 aa17.34■□□□□ 0.37
PRDM16-210ENST00000607632 LOC285556D6RIA3 1793 aa17.33■□□□□ 0.37
PRDM16-210ENST00000607632 BTBD19C9JJ37 291 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 USP5P45974 858 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 ANKRD23Q86SG2 305 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 LCORLQ8N3X6 602 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 TBC1D2Q9BYX2 928 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 CRNKL1Q9BZJ0 848 aaKnown RBP17.33■□□□□ 0.36
PRDM16-210ENST00000607632 GINM1Q9NU53 330 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 STAP2Q9UGK3 403 aa17.33■□□□□ 0.36
PRDM16-210ENST00000607632 A0A0G2JLL6 359 aaPredicted RBP17.32■□□□□ 0.36
PRDM16-210ENST00000607632 ERC2O15083 957 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 FKTNO75072 461 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
PRDM16-210ENST00000607632 CHGBP05060 677 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 HLA-DOAP06340 250 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 SLFNL1Q499Z3 407 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 TSHZ3Q63HK5 1081 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 TATDN1Q6P1N9 297 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 PRRT2Q7Z6L0 340 aaPredicted RBP17.32■□□□□ 0.36
PRDM16-210ENST00000607632 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 ZHX2Q9Y6X8 837 aa17.32■□□□□ 0.36
PRDM16-210ENST00000607632 MX1P20591 662 aa17.31■□□□□ 0.36
PRDM16-210ENST00000607632 GABPAQ06546 454 aa17.31■□□□□ 0.36
PRDM16-210ENST00000607632 ANKRD45Q5TZF3 282 aa17.31■□□□□ 0.36
PRDM16-210ENST00000607632 GPAT2Q6NUI2 795 aa17.31■□□□□ 0.36
PRDM16-210ENST00000607632 CTU1Q7Z7A3 348 aaKnown RBP17.31■□□□□ 0.36
PRDM16-210ENST00000607632 TTC6Q86TZ1 520 aa17.31■□□□□ 0.36
PRDM16-210ENST00000607632 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
PRDM16-210ENST00000607632 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
PRDM16-210ENST00000607632 SAP30BPQ9UHR5 308 aaKnown RBP17.31■□□□□ 0.36
PRDM16-210ENST00000607632 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
PRDM16-210ENST00000607632 ADGRA2Q96PE1 1338 aa17.3■□□□□ 0.36
PRDM16-210ENST00000607632 IGHDP01880 384 aa17.3■□□□□ 0.36
PRDM16-210ENST00000607632 JAG1P78504 1218 aa17.3■□□□□ 0.36
PRDM16-210ENST00000607632 TAF1CQ15572 869 aaPredicted RBP17.3■□□□□ 0.36
PRDM16-210ENST00000607632 ARMT1Q9H993 441 aa17.3■□□□□ 0.36
PRDM16-210ENST00000607632 ZFYVE28Q9HCC9 887 aa17.3■□□□□ 0.36
PRDM16-210ENST00000607632 ATP8A2Q9NTI2 1148 aa17.3■□□□□ 0.36
PRDM16-210ENST00000607632 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.3■□□□□ 0.36
PRDM16-210ENST00000607632 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
PRDM16-210ENST00000607632 TLR2O60603 784 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 MBD4O95243 580 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
PRDM16-210ENST00000607632 ASNSP08243 561 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 PLCD1P51178 756 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 DGKZQ13574 1117 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 FASTKD5Q7L8L6 764 aaKnown RBP17.29■□□□□ 0.36
PRDM16-210ENST00000607632 SDR42E1Q8WUS8 393 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 APPBP2Q92624 585 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 ABHD8Q96I13 439 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 WDR18Q9BV38 432 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 PUS7LQ9H0K6 701 aaKnown RBP17.29■□□□□ 0.36
PRDM16-210ENST00000607632 SLC45A1Q9Y2W3 748 aa17.29■□□□□ 0.36
PRDM16-210ENST00000607632 BAZ2AQ9UIF9 1905 aaKnown RBP17.29■□□□□ 0.36
PRDM16-210ENST00000607632 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
PRDM16-210ENST00000607632 PDE1AP54750 535 aa17.28■□□□□ 0.36
PRDM16-210ENST00000607632 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
PRDM16-210ENST00000607632 SH3D19Q5HYK7 790 aa17.28■□□□□ 0.36
PRDM16-210ENST00000607632 CCDC84Q86UT8 332 aaPredicted RBP17.28■□□□□ 0.36
PRDM16-210ENST00000607632 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
PRDM16-210ENST00000607632 ZNF280CQ8ND82 737 aa17.28■□□□□ 0.36
PRDM16-210ENST00000607632 RNF113AO15541 343 aaKnown RBP17.27■□□□□ 0.36
PRDM16-210ENST00000607632 PRKAB2O43741 272 aa17.27■□□□□ 0.36
PRDM16-210ENST00000607632 SHMT1P34896 483 aa17.27■□□□□ 0.36
PRDM16-210ENST00000607632 PROCA1Q8NCQ7 364 aaPredicted RBP17.27■□□□□ 0.36
PRDM16-210ENST00000607632 OSBP2Q969R2 916 aa17.27■□□□□ 0.36
PRDM16-210ENST00000607632 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms