RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	CEP126	Q9P2H0	1117 aa		13.33	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	GOLIM4	O00461	696 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	OPA1	O60313	960 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PC	P11498	1178 aa	Known RBP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ATP1A3	P13637	1013 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PRLR	P16471	622 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	GTF2A1	P52655	376 aa	Predicted RBP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TSR1	Q2NL82	804 aa	Known RBP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	B4GALNT4	Q76KP1	1039 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	LRP10	Q7Z4F1	713 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TAX1BP1	Q86VP1	789 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	AMOTL1	Q8IY63	956 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TTC5	Q8N0Z6	440 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	C3orf20	Q8ND61	904 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	DDX54	Q8TDD1	881 aa	Known RBP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	AFAP1L1	Q8TED9	768 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	XAGE3	Q8WTP9	111 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	WDR24	Q96S15	920 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MYD88	Q99836	296 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	NUP58	Q9BVL2	599 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	KRT23	Q9C075	422 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ANKZF1	Q9H8Y5	726 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	CWC25	Q9NXE8	425 aa	Predicted RBP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	LIMA1	Q9UHB6	759 aa	Known RBP	13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MAN1B1	Q9UKM7	699 aa		13.32	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	C4A	P0C0L4	1744 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	C4B	P0C0L5	1744 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236		A0A087WZG4	1122 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SH2B2	O14492	632 aa	Predicted RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	NPHP1	O15259	732 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SOX12	O15370	315 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ZBTB43	O43298	467 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	DEXI	O95424	95 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	FMNL1	O95466	1100 aa	Predicted RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	POLR3D	P05423	398 aa	Predicted RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	GNAT2	P19087	354 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TRAPPC10	P48553	1259 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ST5	P78524	1137 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	CDK17	Q00537	523 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SET	Q01105	290 aa	Predicted RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SSRP1	Q08945	709 aa	Known RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PPFIA1	Q13136	1202 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	NNT	Q13423	1086 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PROSER3	Q2NL68	480 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MPRIP	Q6WCQ1	1025 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MMS22L	Q6ZRQ5	1243 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MICALCL	Q6ZW33	695 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	DDX46	Q7L014	1031 aa	Known RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	COPS6	Q7L5N1	327 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	IFNL2	Q8IZJ0	200 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MYCBP	Q99417	103 aa	Predicted RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	NCAPG	Q9BPX3	1015 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	VPS18	Q9P253	973 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	RNF14	Q9UBS8	474 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ADD3	Q9UEY8	706 aa	Known RBP	13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	JRKL	Q9Y4A0	524 aa		13.31	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	RGPD8	O14715	1765 aa	Predicted RBP	13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ARFGEF2	Q9Y6D5	1785 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	GOLGA8K	D6RF30	607 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	EPB41	P11171	864 aa	Known RBP	13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	EMC10	Q5UCC4	262 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PAPD7	Q5XG87	772 aa	Known RBP	13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ALS2CL	Q60I27	953 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ATG9A	Q7Z3C6	839 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	YTHDF3	Q7Z739	585 aa	Known RBP	13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	CCDC170	Q8IYT3	715 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PDILT	Q8N807	584 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	IGSF22	Q8N9C0	903 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	EIF1AD	Q8N9N8	165 aa	Known RBP	13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	RAPGEF4	Q8WZA2	1011 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PAGR1	Q9BTK6	254 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PDE11A	Q9HCR9	933 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ST7	Q9NRC1	585 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	INTS13	Q9NVM9	706 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MYO6	Q9UM54	1294 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MROH7-TTC4	A0A0A0MT08	1334 aa		13.3	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	BCL9L	Q86UU0	1499 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	EIF3CL	B5ME19	914 aa	Known RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	BIN1	O00499	593 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	EBAG9	O00559	213 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	KCNQ3	O43525	872 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SEC31A	O94979	1220 aa	Known RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	IPO7	O95373	1038 aa	Known RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	FGA	P02671	866 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MMP1	P03956	469 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	UQCRFS1P1	P0C7P4	283 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	ATP2B1	P20020	1258 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TNFRSF8	P28908	595 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	USP14	P54578	494 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	FOXO4	P98177	505 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	DRP2	Q13474	957 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	GLE1	Q53GS7	698 aa	Known RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	APOA5	Q6Q788	366 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SH3RF1	Q7Z6J0	888 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TADA2B	Q86TJ2	420 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	COG1	Q8WTW3	980 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms