RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 POLR3DP05423 398 aaPredicted RBP23.45■■□□□ 1.34
PNKP-214ENST00000600573 CCT2P78371 535 aaKnown RBP23.45■■□□□ 1.34
PNKP-214ENST00000600573 GPHNQ9NQX3 736 aaPredicted RBP23.45■■□□□ 1.34
PNKP-214ENST00000600573 MYH2Q9UKX2 1941 aa23.45■■□□□ 1.34
PNKP-214ENST00000600573 CPLX1O14810 134 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 METAP2P50579 478 aaKnown RBP eCLIP23.44■■□□□ 1.34
PNKP-214ENST00000600573 APOA5Q6Q788 366 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 ZDHHC15Q96MV8 337 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 TAOK2Q9UL54 1235 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 HPS5Q9UPZ3 1129 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 CCDC196A0A1B0GTZ2 297 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 MBD3O95983 291 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 USP17L8P0C7I0 530 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 ZSCAN10Q96SZ4 725 aaPredicted RBP23.44■■□□□ 1.34
PNKP-214ENST00000600573 SGIP1Q9BQI5 828 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 SERPINA10Q9UK55 444 aa23.44■■□□□ 1.34
PNKP-214ENST00000600573 NID2Q14112 1375 aa23.43■■□□□ 1.34
PNKP-214ENST00000600573 MYH15Q9Y2K3 1946 aa23.43■■□□□ 1.34
PNKP-214ENST00000600573 PTPDC1A2A3K4 754 aa23.43■■□□□ 1.34
PNKP-214ENST00000600573 RANBP6O60518 1105 aaKnown RBP23.43■■□□□ 1.34
PNKP-214ENST00000600573 JAK2O60674 1132 aa23.43■■□□□ 1.34
PNKP-214ENST00000600573 TMEM87AQ8NBN3 555 aa23.43■■□□□ 1.34
PNKP-214ENST00000600573 CHAMP1Q96JM3 812 aa23.43■■□□□ 1.34
PNKP-214ENST00000600573 BAZ2AQ9UIF9 1905 aaKnown RBP23.43■■□□□ 1.34
PNKP-214ENST00000600573 CYP2D7A0A087X1C5 515 aa23.42■■□□□ 1.34
PNKP-214ENST00000600573 PSDA5PKW4 1024 aaPredicted RBP23.42■■□□□ 1.34
PNKP-214ENST00000600573 CTDNEP1O95476 244 aa23.42■■□□□ 1.34
PNKP-214ENST00000600573 CRKP46108 304 aa23.42■■□□□ 1.34
PNKP-214ENST00000600573 TTC6Q86TZ1 520 aa23.42■■□□□ 1.34
PNKP-214ENST00000600573 MAPKAPK5Q8IW41 473 aa23.42■■□□□ 1.34
PNKP-214ENST00000600573 FLT1P17948 1338 aa23.42■■□□□ 1.34
PNKP-214ENST00000600573 F8W031 263 aaPredicted RBP23.41■■□□□ 1.34
PNKP-214ENST00000600573 CALM1P0DP23 149 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 CALM2P0DP24 149 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 CALM3P0DP25 149 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 SEC23AQ15436 765 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 LARGE2Q8N3Y3 721 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 MKNK2Q9HBH9 465 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 USP40Q9NVE5 1235 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 TNKSO95271 1327 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 NPM3O75607 178 aaKnown RBP23.41■■□□□ 1.34
PNKP-214ENST00000600573 CSPP1Q1MSJ5 1256 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 NKX2-3Q8TAU0 364 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 TCP11L1Q9NUJ3 509 aa23.41■■□□□ 1.34
PNKP-214ENST00000600573 ISY1Q9ULR0 285 aaKnown RBP23.41■■□□□ 1.34
PNKP-214ENST00000600573 CYP2D6P10635 497 aa23.4■■□□□ 1.34
PNKP-214ENST00000600573 MMP14P50281 582 aa23.4■■□□□ 1.34
PNKP-214ENST00000600573 L1TD1Q5T7N2 865 aaKnown RBP23.4■■□□□ 1.34
PNKP-214ENST00000600573 APOBEC3HQ6NTF7 200 aaKnown RBP23.4■■□□□ 1.34
PNKP-214ENST00000600573 CDC37L1Q7L3B6 337 aa23.4■■□□□ 1.34
PNKP-214ENST00000600573 ZNF444Q8N0Y2 327 aaPredicted RBP23.4■■□□□ 1.34
PNKP-214ENST00000600573 ZSCAN16Q9H4T2 348 aaPredicted RBP23.4■■□□□ 1.34
PNKP-214ENST00000600573 NCOA5Q9HCD5 579 aaKnown RBP23.4■■□□□ 1.34
PNKP-214ENST00000600573 TSPY2A6NKD2 308 aa23.39■■□□□ 1.33
PNKP-214ENST00000600573 GOLGA8AA7E2F4 631 aa23.39■■□□□ 1.33
PNKP-214ENST00000600573 H3BQV1 296 aa23.39■■□□□ 1.33
PNKP-214ENST00000600573 DTNBO60941 627 aa23.39■■□□□ 1.33
PNKP-214ENST00000600573 IFIT1BQ5T764 474 aaKnown RBP23.39■■□□□ 1.33
PNKP-214ENST00000600573 IFFO2Q5TF58 517 aa23.39■■□□□ 1.33
PNKP-214ENST00000600573 STK11IPQ8N1F8 1099 aa23.39■■□□□ 1.33
PNKP-214ENST00000600573 KCNQ5Q9NR82 932 aa23.39■■□□□ 1.33
PNKP-214ENST00000600573 NCLP19338 710 aaKnown RBP23.38■■□□□ 1.33
PNKP-214ENST00000600573 FOXD4L6Q3SYB3 417 aaPredicted RBP23.38■■□□□ 1.33
PNKP-214ENST00000600573 FOXD4L3Q6VB84 417 aaPredicted RBP23.38■■□□□ 1.33
PNKP-214ENST00000600573 C16orf86Q6ZW13 317 aa23.38■■□□□ 1.33
PNKP-214ENST00000600573 CATIPQ7Z7H3 387 aa23.38■■□□□ 1.33
PNKP-214ENST00000600573 DGKHQ86XP1 1220 aa23.38■■□□□ 1.33
PNKP-214ENST00000600573 ANKS1AQ92625 1134 aa23.38■■□□□ 1.33
PNKP-214ENST00000600573 DDX11Q96FC9 970 aa23.38■■□□□ 1.33
PNKP-214ENST00000600573 MXD3Q9BW11 206 aa23.38■■□□□ 1.33
PNKP-214ENST00000600573 ZNRF3Q9ULT6 936 aa23.38■■□□□ 1.33
PNKP-214ENST00000600573 GOLGA6L3A6NEY3 463 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 VIL1P09327 827 aaKnown RBP23.37■■□□□ 1.33
PNKP-214ENST00000600573 SCNN1DP51172 638 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 CDC42EP5Q6NZY7 148 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 KIAA0825Q8IV33 1275 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 NIM1KQ8IY84 436 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 ENAHQ8N8S7 591 aaPredicted RBP23.37■■□□□ 1.33
PNKP-214ENST00000600573 GPT2Q8TD30 523 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 CNPY2Q9Y2B0 182 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 NAV1Q8NEY1 1877 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 YDJCA8MPS7 323 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 PRDM1O75626 825 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 IARSP41252 1262 aaKnown RBP23.37■■□□□ 1.33
PNKP-214ENST00000600573 RSBN1LQ6PCB5 846 aaPredicted RBP23.37■■□□□ 1.33
PNKP-214ENST00000600573 MICU3Q86XE3 530 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 ZNF654Q8IZM8 581 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 WASF1Q92558 559 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 ZKSCAN3Q9BRR0 538 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 TAOK3Q9H2K8 898 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 HDAC9Q9UKV0 1011 aa23.37■■□□□ 1.33
PNKP-214ENST00000600573 ECM29Q5VYK3 1845 aa23.36■■□□□ 1.33
PNKP-214ENST00000600573 FSD2A1L4K1 749 aa23.36■■□□□ 1.33
PNKP-214ENST00000600573 WDHD1O75717 1129 aaPredicted RBP23.36■■□□□ 1.33
PNKP-214ENST00000600573 DDAH1O94760 285 aa23.36■■□□□ 1.33
PNKP-214ENST00000600573 PLCD1P51178 756 aa23.36■■□□□ 1.33
PNKP-214ENST00000600573 RTN1Q16799 776 aa23.36■■□□□ 1.33
PNKP-214ENST00000600573 IDI2Q9BXS1 227 aa23.36■■□□□ 1.33
PNKP-214ENST00000600573 ZNF277Q9NRM2 450 aaPredicted RBP23.36■■□□□ 1.33
PNKP-214ENST00000600573 RBM28Q9NW13 759 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms