RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PPARAQ07869 468 aa23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 CST9Q5W186 159 aa23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 MOB2Q70IA6 237 aa23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 METTL16Q86W50 562 aaKnown RBP23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 FOXP4Q8IVH2 680 aaPredicted RBP23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 SLC44A5Q8NCS7 719 aa23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 EHD4Q9H223 541 aa23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 RBM8AQ9Y5S9 174 aaKnown RBP23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 TRPM7Q96QT4 1865 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 SEC24BO95487 1268 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 HAND2P61296 217 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 MAP3K10Q02779 954 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 AMOTL1Q8IY63 956 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 STK11IPQ8N1F8 1099 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 SERPINB13Q9UIV8 391 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 TACC3Q9Y6A5 838 aa23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 U3KPZ7 1027 aaPredicted RBP23.85■■□□□ 1.41
SHKBP1-222ENST00000600320 ROBO3Q96MS0 1386 aa23.84■■□□□ 1.41
SHKBP1-222ENST00000600320 TBC1D12O60347 775 aa23.84■■□□□ 1.41
SHKBP1-222ENST00000600320 USP2O75604 605 aaPredicted RBP23.84■■□□□ 1.41
SHKBP1-222ENST00000600320 NF2P35240 595 aa23.84■■□□□ 1.41
SHKBP1-222ENST00000600320 CTDSPL2Q05D32 466 aa23.84■■□□□ 1.41
SHKBP1-222ENST00000600320 NBPF3Q9H094 633 aa23.84■■□□□ 1.41
SHKBP1-222ENST00000600320 CEP350Q5VT06 3117 aa23.84■■□□□ 1.41
SHKBP1-222ENST00000600320 RRP1BQ14684 758 aaKnown RBP23.83■■□□□ 1.41
SHKBP1-222ENST00000600320 DCAF15Q66K64 600 aa23.83■■□□□ 1.41
SHKBP1-222ENST00000600320 CRACR2BQ8N4Y2 399 aaPredicted RBP23.83■■□□□ 1.41
SHKBP1-222ENST00000600320 ZNF341Q9BYN7 854 aa23.83■■□□□ 1.41
SHKBP1-222ENST00000600320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.83■■□□□ 1.41
SHKBP1-222ENST00000600320 CTNNA3Q9UI47 895 aa23.83■■□□□ 1.41
SHKBP1-222ENST00000600320 ANAPC4Q9UJX5 808 aa23.83■■□□□ 1.41
SHKBP1-222ENST00000600320 LAMA4Q16363 1823 aa23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 REC8O95072 547 aa23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 C16orf86Q6ZW13 317 aa23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 TBC1D10CQ8IV04 446 aa23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 HOOK2Q96ED9 719 aa23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 GBA2Q9HCG7 927 aaPredicted RBP23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 INCENPQ9NQS7 918 aa23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 HERC5Q9UII4 1024 aaKnown RBP23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 ANGEL1Q9UNK9 670 aaKnown RBP23.82■■□□□ 1.4
SHKBP1-222ENST00000600320 PAPPA2Q9BXP8 1791 aa23.81■■□□□ 1.4
SHKBP1-222ENST00000600320 PHF20L1A8MW92 1017 aa23.81■■□□□ 1.4
SHKBP1-222ENST00000600320 SHMT1P34896 483 aa23.81■■□□□ 1.4
SHKBP1-222ENST00000600320 NECTIN1Q15223 517 aa23.81■■□□□ 1.4
SHKBP1-222ENST00000600320 TAF6LQ9Y6J9 622 aa23.81■■□□□ 1.4
SHKBP1-222ENST00000600320 ZNF213O14771 459 aa23.8■■□□□ 1.4
SHKBP1-222ENST00000600320 CYP21A2P08686 494 aa23.8■■□□□ 1.4
SHKBP1-222ENST00000600320 CDK8P49336 464 aa23.8■■□□□ 1.4
SHKBP1-222ENST00000600320 TTLL12Q14166 644 aaPredicted RBP23.8■■□□□ 1.4
SHKBP1-222ENST00000600320 KLRG1Q96E93 195 aa23.8■■□□□ 1.4
SHKBP1-222ENST00000600320 TRIM34Q9BYJ4 488 aa23.8■■□□□ 1.4
SHKBP1-222ENST00000600320 ZNF112Q9UJU3 913 aa23.8■■□□□ 1.4
SHKBP1-222ENST00000600320 UBE2Q2LH0YL09 131 aa23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 PPP1R12BO60237 982 aaPredicted RBP23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 INPP5BP32019 993 aa23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 MAP3K11Q16584 847 aa23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 IMMTQ16891 758 aaKnown RBP23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 TATDN1Q6P1N9 297 aa23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 USP26Q9BXU7 913 aa23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 SWAP70Q9UH65 585 aa23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.79■■□□□ 1.4
SHKBP1-222ENST00000600320 SLC27A2O14975 620 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 PRDM1O75626 825 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 HSPA6P17066 643 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 JAG1P78504 1218 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 SHROOM1Q2M3G4 852 aaPredicted RBP23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 CREB3L3Q68CJ9 461 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 ARMC9Q7Z3E5 817 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 NKX2-3Q8TAU0 364 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 WRNIP1Q96S55 665 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 OTOFQ9HC10 1997 aa23.78■■□□□ 1.4
SHKBP1-222ENST00000600320 FKBP1BP68106 108 aa23.77■■□□□ 1.4
SHKBP1-222ENST00000600320 C2orf69Q8N8R5 385 aa23.77■■□□□ 1.4
SHKBP1-222ENST00000600320 STAG1Q8WVM7 1258 aa23.77■■□□□ 1.4
SHKBP1-222ENST00000600320 SLC3A2P08195 630 aaKnown RBP23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 FGRP09769 529 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 RASA1P20936 1047 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 HSPA4P34932 840 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 IREB2P48200 963 aaKnown RBP23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 MAP3K9P80192 1104 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 AKNAD1Q5T1N1 836 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 LDLRAD1Q5T700 205 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 STOX1Q6ZVD7 989 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 TAOK2Q9UL54 1235 aa23.76■■□□□ 1.39
SHKBP1-222ENST00000600320 TMEM88BA6NKF7 163 aa23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 GDF11O95390 407 aa23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 AKR1B1P15121 316 aa23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 RASEFQ8IZ41 740 aa23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 ZKSCAN4Q969J2 545 aaPredicted RBP23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 CLMNQ96JQ2 1002 aa23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 NEDD4P46934 1319 aa23.75■■□□□ 1.39
SHKBP1-222ENST00000600320 CAP2P40123 477 aa23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 APLP1P51693 650 aa23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 PDE4BQ07343 736 aa23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 VGLL4Q14135 290 aa23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 CERKLQ49MI3 558 aaPredicted RBP23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 KCNB2Q92953 911 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms