RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 LCORLQ8N3X6 602 aa20.81■□□□□ 0.92
SHKBP1-212ENST00000596163 APPBP2Q92624 585 aa20.81■□□□□ 0.92
SHKBP1-212ENST00000596163 OTUD5Q96G74 571 aa20.81■□□□□ 0.92
SHKBP1-212ENST00000596163 ARMT1Q9H993 441 aa20.81■□□□□ 0.92
SHKBP1-212ENST00000596163 ATP8A2Q9NTI2 1148 aa20.81■□□□□ 0.92
SHKBP1-212ENST00000596163 RNF186Q9NXI6 227 aa20.81■□□□□ 0.92
SHKBP1-212ENST00000596163 SAP30BPQ9UHR5 308 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-212ENST00000596163 POLR3DP05423 398 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-212ENST00000596163 CENPBP07199 599 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-212ENST00000596163 PPIL2Q13356 520 aa20.8■□□□□ 0.92
SHKBP1-212ENST00000596163 AK9Q5TCS8 1911 aa20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 TRPA1O75762 1119 aa20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 GJA5P36382 358 aa20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 AMOTL1Q8IY63 956 aa20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 MCM9Q9NXL9 1143 aa20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 MYO5AQ9Y4I1 1855 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-212ENST00000596163 TESPA1A2RU30 521 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 NEFLP07196 543 aa20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 HSPA8P11142 646 aaKnown RBP20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 CETPP11597 493 aa20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 SNAPC2Q13487 334 aa20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 SLFNL1Q499Z3 407 aa20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 METTL16Q86W50 562 aaKnown RBP20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 PUS7LQ9H0K6 701 aaKnown RBP20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 EHD4Q9H223 541 aa20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 TAOK2Q9UL54 1235 aa20.78■□□□□ 0.92
SHKBP1-212ENST00000596163 GNAT2P19087 354 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 LBX1P52954 281 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 IFNL1Q8IU54 200 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 SDR42E1Q8WUS8 393 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 CNKSR2Q8WXI2 1034 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 TBC1D2Q9BYX2 928 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 DCP1AQ9NPI6 582 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 GINM1Q9NU53 330 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 SERPINB13Q9UIV8 391 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 SLC4A4Q9Y6R1 1079 aa20.77■□□□□ 0.92
SHKBP1-212ENST00000596163 CCL15-CCL14A0A0B4J2E2 113 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 FAM196BA6NMK8 535 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 IRF6O14896 467 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 CAP2P40123 477 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 CCL15Q16663 113 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 MS4A4AQ96JQ5 239 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 STRBPQ96SI9 672 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 ZHX2Q9Y6X8 837 aa20.76■□□□□ 0.91
SHKBP1-212ENST00000596163 CXCL11O14625 94 aa20.75■□□□□ 0.91
SHKBP1-212ENST00000596163 PRKAB2O43741 272 aa20.75■□□□□ 0.91
SHKBP1-212ENST00000596163 CHGBP05060 677 aa20.75■□□□□ 0.91
SHKBP1-212ENST00000596163 SLURP2P0DP57 97 aa20.75■□□□□ 0.91
SHKBP1-212ENST00000596163 PTPRAP18433 802 aa20.75■□□□□ 0.91
SHKBP1-212ENST00000596163 OSBP2Q969R2 916 aa20.75■□□□□ 0.91
SHKBP1-212ENST00000596163 PCNTO95613 3336 aa20.75■□□□□ 0.91
SHKBP1-212ENST00000596163 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
SHKBP1-212ENST00000596163 GIMAP6Q6P9H5 292 aa20.74■□□□□ 0.91
SHKBP1-212ENST00000596163 KCNH4Q9UQ05 1017 aa20.74■□□□□ 0.91
SHKBP1-212ENST00000596163 GPAA1O43292 621 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 ASNSP08243 561 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 ZMYM1Q5SVZ6 1142 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 BRI3BPQ8WY22 251 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 RILPL2Q969X0 211 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 CFHR5Q9BXR6 569 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 AS3MTQ9HBK9 375 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 TSKSQ9UJT2 592 aa20.73■□□□□ 0.91
SHKBP1-212ENST00000596163 USP17L5A8MUK1 530 aa20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 IGF2BP3O00425 579 aaKnown RBP eCLIP20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 PLCD1P51178 756 aa20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 TATDN1Q6P1N9 297 aa20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 ZCCHC17Q9NP64 241 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 HELLSQ9NRZ9 838 aa20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 SWAP70Q9UH65 585 aa20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 AFG3L2Q9Y4W6 797 aa20.72■□□□□ 0.91
SHKBP1-212ENST00000596163 APPP05067 770 aa20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 FASTKD5Q7L8L6 764 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 PTPN18Q99952 460 aa20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 NACAP1Q9BZK3 213 aa20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 DNAJC18Q9H819 358 aa20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 CABP5Q9NP86 173 aa20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 ARPP21Q9UBL0 812 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 OTOFQ9HC10 1997 aa20.71■□□□□ 0.91
SHKBP1-212ENST00000596163 PATL2C9JE40 543 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 USP17L12C9JPN9 530 aa20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 USP17L21D6R901 530 aa20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 M0R2C6 588 aa20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 TBC1D8O95759 1140 aa20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 CERKLQ49MI3 558 aaPredicted RBP20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 NOM1Q5C9Z4 860 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 C12orf60Q5U649 245 aa20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 CENPQQ7L2Z9 268 aaPredicted RBP20.7■□□□□ 0.9
SHKBP1-212ENST00000596163 GSG1L2A8MUP6 293 aa20.69■□□□□ 0.9
SHKBP1-212ENST00000596163 HIP1O00291 1037 aa20.69■□□□□ 0.9
SHKBP1-212ENST00000596163 GABPAQ06546 454 aa20.69■□□□□ 0.9
SHKBP1-212ENST00000596163 RRP1BQ14684 758 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-212ENST00000596163 ANKRD23Q86SG2 305 aa20.69■□□□□ 0.9
SHKBP1-212ENST00000596163 ZNF280CQ8ND82 737 aa20.69■□□□□ 0.9
SHKBP1-212ENST00000596163 ZFYVE28Q9HCC9 887 aa20.69■□□□□ 0.9
SHKBP1-212ENST00000596163 A0A0G2JLL6 359 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-212ENST00000596163 GDF11O95390 407 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms