RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 USP31Q70CQ4 1352 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 TRIM27P14373 513 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 GYG1P46976 350 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 ANKRD44Q8N8A2 993 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 ZBTB21Q9ULJ3 1066 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 CIAO1O76071 339 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 NOGQ13253 232 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 KLF18A0A0U1RQI7 1052 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 SLFN13Q68D06 897 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 ARID5AQ03989 594 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
SEH1L-208ENST00000590843 USP50Q70EL3 339 aaPredicted RBP12.98□□□□□ -0.33
SEH1L-208ENST00000590843 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
SEH1L-208ENST00000590843 ADCY7P51828 1080 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
SEH1L-208ENST00000590843 PDE8BO95263 885 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
SEH1L-208ENST00000590843 PPFIBP1Q86W92 1011 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 RNF169Q8NCN4 708 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 MEIS3Q99687 375 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 ZHX2Q9Y6X8 837 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 CBFA2T2O43439 604 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 FOSP01100 380 aaPredicted RBP12.97□□□□□ -0.33
SEH1L-208ENST00000590843 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
SEH1L-208ENST00000590843 PRAMEF22A3QJZ6 481 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 ASB14A6NK59 587 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 CYP27B1O15528 508 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 ERLIN2O94905 339 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 CRKP46108 304 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 LDHDQ86WU2 507 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 PDILTQ8N807 584 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 GIMAP8Q8ND71 665 aaPredicted RBP12.97□□□□□ -0.33
SEH1L-208ENST00000590843 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 CPDO75976 1380 aa12.97□□□□□ -0.33
SEH1L-208ENST00000590843 APLP1P51693 650 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 RNASELQ05823 741 aaKnown RBP12.96□□□□□ -0.33
SEH1L-208ENST00000590843 STRIP1Q5VSL9 837 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 TBC1D9BQ66K14 1250 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 SLC17A8Q8NDX2 589 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 SERPINB13Q9UIV8 391 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 PA2G4Q9UQ80 394 aaKnown RBP12.96□□□□□ -0.33
SEH1L-208ENST00000590843 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
SEH1L-208ENST00000590843 MBD3O95983 291 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 FBXO11Q86XK2 927 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 EFCC1Q9HA90 598 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 CCL15-CCL14A0A0B4J2E2 113 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 ELF1P32519 619 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 CCL15Q16663 113 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
SEH1L-208ENST00000590843 VAMP4O75379 141 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 TOP1P11387 765 aaKnown RBP12.96□□□□□ -0.34
SEH1L-208ENST00000590843 FCER1AP12319 257 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 P4HA1P13674 534 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.34
SEH1L-208ENST00000590843 FMNL3Q8IVF7 1028 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 FAM212AQ96EL1 285 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 ARHGEF35A5YM69 484 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 C19orf81C9J6K1 198 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 CCDC40Q4G0X9 1142 aa12.96□□□□□ -0.34
SEH1L-208ENST00000590843 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
SEH1L-208ENST00000590843 ZNF594Q96JF6 807 aaPredicted RBP12.95□□□□□ -0.34
SEH1L-208ENST00000590843 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L15C9J2P7 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L13C9JLJ4 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L11C9JVI0 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L18D6R9N7 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L22D6RA61 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L17D6RBQ6 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L19D6RCP7 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L20D6RJB6 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L24Q0WX57 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 ELMOD1Q8N336 334 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 FAM50BQ9Y247 325 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 NUDT12Q9BQG2 462 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 GGA3Q9NZ52 723 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 RUFY4Q6ZNE9 571 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 IWS1Q96ST2 819 aa12.95□□□□□ -0.34
SEH1L-208ENST00000590843 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 INO80BQ9C086 356 aaPredicted RBP12.94□□□□□ -0.34
SEH1L-208ENST00000590843 MYL3P08590 195 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 TIMM10P62072 90 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 TFAP4Q01664 338 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 KRT25Q7Z3Z0 450 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 CCND2P30279 289 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 KRT2P35908 639 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
SEH1L-208ENST00000590843 TMEM179Q6ZVK1 233 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms