RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 FZD1Q9UP38 647 aa18.44■□□□□ 0.54
RPRD1A-208ENST00000589050 FAM196BA6NMK8 535 aa18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 PPP1R12BO60237 982 aaPredicted RBP18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 PPARAQ07869 468 aa18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 CST9Q5W186 159 aa18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.43■□□□□ 0.542e-6■■□□□ 13.2
RPRD1A-208ENST00000589050 GBA2Q9HCG7 927 aaPredicted RBP18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 HERC5Q9UII4 1024 aaKnown RBP18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
RPRD1A-208ENST00000589050 POLR2AP24928 1970 aaKnown RBP18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 TBC1D12O60347 775 aa18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 REC8O95072 547 aa18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 METTL16Q86W50 562 aaKnown RBP18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 C2orf69Q8N8R5 385 aa18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
RPRD1A-208ENST00000589050 USP2O75604 605 aaPredicted RBP18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 IREB2P48200 963 aaKnown RBP18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 HAND2P61296 217 aa18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 MAP3K10Q02779 954 aa18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 IMMTQ16891 758 aaKnown RBP18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 C8orf34Q49A92 452 aa18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 MOB2Q70IA6 237 aa18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 ARMC9Q7Z3E5 817 aa18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 STK11IPQ8N1F8 1099 aa18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 DNAJC18Q9H819 358 aa18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 RBM8AQ9Y5S9 174 aaKnown RBP18.41■□□□□ 0.54
RPRD1A-208ENST00000589050 ZNF213O14771 459 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 SLC3A2P08195 630 aaKnown RBP18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 FKBP1BP68106 108 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 GABPAQ06546 454 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 C16orf86Q6ZW13 317 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 WRNIP1Q96S55 665 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 SWAP70Q9UH65 585 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 ANAPC4Q9UJX5 808 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 MYH1P12882 1939 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 ROBO3Q96MS0 1386 aa18.4■□□□□ 0.54
RPRD1A-208ENST00000589050 TMEM88BA6NKF7 163 aa18.39■□□□□ 0.53
RPRD1A-208ENST00000589050 KLRG1Q96E93 195 aa18.39■□□□□ 0.53
RPRD1A-208ENST00000589050 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
RPRD1A-208ENST00000589050 PAPPA2Q9BXP8 1791 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 SIPA1L1O43166 1804 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 UBE2Q2LH0YL09 131 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 EIF5BO60841 1220 aaKnown RBP18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 SHMT1P34896 483 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 CDK8P49336 464 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 APLP1P51693 650 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 PDE4BQ07343 736 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 ZNF112Q9UJU3 913 aa18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 BAZ2AQ9UIF9 1905 aaKnown RBP18.38■□□□□ 0.53
RPRD1A-208ENST00000589050 LAMB1P07942 1786 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 PHF20L1A8MW92 1017 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 MAP3K9P80192 1104 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 TATDN1Q6P1N9 297 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 TBC1D10CQ8IV04 446 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
RPRD1A-208ENST00000589050 PRDM1O75626 825 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 CYP21A2P08686 494 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 INPP5BP32019 993 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 HUNKP57058 714 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 C1QTNF8P60827 252 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 RRP1BQ14684 758 aaKnown RBP18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 CERKLQ49MI3 558 aaPredicted RBP18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 ANKRD13AQ8IZ07 590 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 ZKSCAN4Q969J2 545 aaPredicted RBP18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 INCENPQ9NQS7 918 aa18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 ABT1Q9ULW3 272 aaKnown RBP18.36■□□□□ 0.53
RPRD1A-208ENST00000589050 SLC27A2O14975 620 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 CTNND1O60716 968 aaKnown RBP18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 GDF11O95390 407 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 SEC24BO95487 1268 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 VGLL4Q14135 290 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 AKNAD1Q5T1N1 836 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 LDLRAD1Q5T700 205 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 CREB3L3Q68CJ9 461 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 STAG1Q8WVM7 1258 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 TOMM22Q9NS69 142 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 CSADQ9Y600 493 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 TACC3Q9Y6A5 838 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 TLL2Q9Y6L7 1015 aa18.35■□□□□ 0.53
RPRD1A-208ENST00000589050 EPB41L2O43491 1005 aaKnown RBP18.34■□□□□ 0.53
RPRD1A-208ENST00000589050 RASA1P20936 1047 aa18.34■□□□□ 0.53
RPRD1A-208ENST00000589050 CAP2P40123 477 aa18.34■□□□□ 0.53
RPRD1A-208ENST00000589050 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms