RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 CDK5RAP2Q96SN8 1893 aa19.41■□□□□ 0.7
RETREG3-206ENST00000588423 HLA-DOAP06340 250 aa19.4■□□□□ 0.7
RETREG3-206ENST00000588423 OTUD7BQ6GQQ9 843 aa19.4■□□□□ 0.7
RETREG3-206ENST00000588423 IRF6O14896 467 aa19.39■□□□□ 0.69
RETREG3-206ENST00000588423 SNAPC2Q13487 334 aa19.39■□□□□ 0.69
RETREG3-206ENST00000588423 LRRFIP1Q32MZ4 808 aaKnown RBP19.39■□□□□ 0.69
RETREG3-206ENST00000588423 NOM1Q5C9Z4 860 aaKnown RBP19.39■□□□□ 0.69
RETREG3-206ENST00000588423 PICK1Q9NRD5 415 aa19.39■□□□□ 0.69
RETREG3-206ENST00000588423 PALD1Q9ULE6 856 aa19.39■□□□□ 0.69
RETREG3-206ENST00000588423 KCNH4Q9UQ05 1017 aa19.39■□□□□ 0.69
RETREG3-206ENST00000588423 IGF2BP3O00425 579 aaKnown RBP eCLIP19.38■□□□□ 0.69
RETREG3-206ENST00000588423 ZFYP08048 801 aaPredicted RBP19.38■□□□□ 0.69
RETREG3-206ENST00000588423 SLURP2P0DP57 97 aa19.38■□□□□ 0.69
RETREG3-206ENST00000588423 CETPP11597 493 aa19.38■□□□□ 0.69
RETREG3-206ENST00000588423 LCORLQ8N3X6 602 aa19.38■□□□□ 0.69
RETREG3-206ENST00000588423 PTPN18Q99952 460 aa19.38■□□□□ 0.69
RETREG3-206ENST00000588423 CCL15-CCL14A0A0B4J2E2 113 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 PTPRAP18433 802 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 PDE1AP54750 535 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 NUCB1Q02818 461 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 CCL15Q16663 113 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 CHD1LQ86WJ1 897 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 BRI3BPQ8WY22 251 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 EHD4Q9H223 541 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 SAP30BPQ9UHR5 308 aaKnown RBP19.37■□□□□ 0.69
RETREG3-206ENST00000588423 SIPA1L1O43166 1804 aa19.37■□□□□ 0.69
RETREG3-206ENST00000588423 FAM196BA6NMK8 535 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 CXCL11O14625 94 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 MBD4O95243 580 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 CAP2P40123 477 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 IRX6P78412 446 aaPredicted RBP19.36■□□□□ 0.69
RETREG3-206ENST00000588423 SLFNL1Q499Z3 407 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 CRACR2BQ8N4Y2 399 aaPredicted RBP19.36■□□□□ 0.69
RETREG3-206ENST00000588423 TRIM34Q9BYJ4 488 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 TBC1D2Q9BYX2 928 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 DNAJC18Q9H819 358 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 ARMT1Q9H993 441 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 ZCCHC17Q9NP64 241 aaKnown RBP19.36■□□□□ 0.69
RETREG3-206ENST00000588423 ATP8A2Q9NTI2 1148 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 DOCK1Q14185 1865 aa19.36■□□□□ 0.69
RETREG3-206ENST00000588423 DDX60LQ5H9U9 1706 aaKnown RBP19.36■□□□□ 0.69
RETREG3-206ENST00000588423 MYH7P12883 1935 aa19.35■□□□□ 0.69
RETREG3-206ENST00000588423 RNF113AO15541 343 aaKnown RBP19.35■□□□□ 0.69
RETREG3-206ENST00000588423 TBC1D8O95759 1140 aa19.35■□□□□ 0.69
RETREG3-206ENST00000588423 CHGBP05060 677 aa19.35■□□□□ 0.69
RETREG3-206ENST00000588423 APPBP2Q92624 585 aa19.35■□□□□ 0.69
RETREG3-206ENST00000588423 PUS7LQ9H0K6 701 aaKnown RBP19.35■□□□□ 0.69
RETREG3-206ENST00000588423 DCP1AQ9NPI6 582 aaPredicted RBP19.35■□□□□ 0.69
RETREG3-206ENST00000588423 GINM1Q9NU53 330 aa19.35■□□□□ 0.69
RETREG3-206ENST00000588423 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
RETREG3-206ENST00000588423 AFG3L2Q9Y4W6 797 aa19.35■□□□□ 0.69
RETREG3-206ENST00000588423 B4GALNT3Q6L9W6 998 aa19.34■□□□□ 0.69
RETREG3-206ENST00000588423 SDR42E1Q8WUS8 393 aa19.34■□□□□ 0.69
RETREG3-206ENST00000588423 SERPINB13Q9UIV8 391 aa19.34■□□□□ 0.69
RETREG3-206ENST00000588423 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
RETREG3-206ENST00000588423 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
RETREG3-206ENST00000588423 TATDN1Q6P1N9 297 aa19.33■□□□□ 0.68
RETREG3-206ENST00000588423 TICAM2Q86XR7 235 aa19.33■□□□□ 0.68
RETREG3-206ENST00000588423 OSBPL3Q9H4L5 887 aa19.33■□□□□ 0.68
RETREG3-206ENST00000588423 MCM9Q9NXL9 1143 aa19.33■□□□□ 0.68
RETREG3-206ENST00000588423 MYH1P12882 1939 aa19.33■□□□□ 0.68
RETREG3-206ENST00000588423 A0A0G2JLL6 359 aaPredicted RBP19.32■□□□□ 0.68
RETREG3-206ENST00000588423 GPR25O00155 361 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 POLR3DP05423 398 aaPredicted RBP19.32■□□□□ 0.68
RETREG3-206ENST00000588423 PLCD1P51178 756 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 PRRT2Q7Z6L0 340 aaPredicted RBP19.32■□□□□ 0.68
RETREG3-206ENST00000588423 ANKRD23Q86SG2 305 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 TNS4Q8IZW8 715 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 FAM43AQ8N2R8 423 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 OSBP2Q969R2 916 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 EVI5LQ96CN4 794 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 STRBPQ96SI9 672 aaKnown RBP19.32■□□□□ 0.68
RETREG3-206ENST00000588423 FSD1Q9BTV5 496 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 NAV1Q8NEY1 1877 aa19.32■□□□□ 0.68
RETREG3-206ENST00000588423 USP17L5A8MUK1 530 aa19.31■□□□□ 0.68
RETREG3-206ENST00000588423 BTBD19C9JJ37 291 aa19.31■□□□□ 0.68
RETREG3-206ENST00000588423 PRKAB2O43741 272 aa19.31■□□□□ 0.68
RETREG3-206ENST00000588423 ASNSP08243 561 aa19.31■□□□□ 0.68
RETREG3-206ENST00000588423 GABPAQ06546 454 aa19.31■□□□□ 0.68
RETREG3-206ENST00000588423 FASTKD5Q7L8L6 764 aaKnown RBP19.31■□□□□ 0.68
RETREG3-206ENST00000588423 DDRGK1Q96HY6 314 aa19.31■□□□□ 0.68
RETREG3-206ENST00000588423 SLC4A4Q9Y6R1 1079 aa19.31■□□□□ 0.68
RETREG3-206ENST00000588423 GNAT2P19087 354 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 CRHR2Q13324 411 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 MOGSQ13724 837 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 SLC4A8Q2Y0W8 1093 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 GIMAP6Q6P9H5 292 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 PLEKHM2Q8IWE5 1019 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 ZNF296Q8WUU4 475 aaPredicted RBP19.3■□□□□ 0.68
RETREG3-206ENST00000588423 R3HDMLQ9H3Y0 253 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 AS3MTQ9HBK9 375 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 ZFYVE28Q9HCC9 887 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 PHIPQ8WWQ0 1821 aa19.3■□□□□ 0.68
RETREG3-206ENST00000588423 TAF1CQ15572 869 aaPredicted RBP19.29■□□□□ 0.68
RETREG3-206ENST00000588423 ZMYM1Q5SVZ6 1142 aa19.29■□□□□ 0.68
RETREG3-206ENST00000588423 AMOTL1Q8IY63 956 aa19.29■□□□□ 0.68
RETREG3-206ENST00000588423 ZNF280CQ8ND82 737 aa19.29■□□□□ 0.68
RETREG3-206ENST00000588423 WDR18Q9BV38 432 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms