RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 ODF2LQ9ULJ1 636 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 HOXA7P31268 230 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 CLNS1AP54105 237 aaKnown RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 MAK16Q9BXY0 300 aaKnown RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 RRAGDQ9NQL2 400 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 CCT6AP40227 531 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 C16orf71Q8IYS4 520 aaPredicted RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 PLCH2O75038 1416 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 POLR2DO15514 142 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 CALUO43852 315 aaPredicted RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 DIS3L2Q8IYB7 885 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 ZKSCAN3Q9BRR0 538 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 IFIH1Q9BYX4 1025 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 NT5C3AQ9H0P0 336 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 I3L4J1 428 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 HIP1RO75146 1068 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 TRPC3Q13507 836 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 DENND2AQ9ULE3 1009 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 TCOF1Q13428 1488 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 STK10O94804 968 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 TNFAIP3P21580 790 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 TPD52P55327 224 aaPredicted RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 PDE4DQ08499 809 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 VPS52Q8N1B4 723 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 DDX41Q9UJV9 622 aaKnown RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 SLC27A2O14975 620 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 EVI5O60447 810 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 ARL1P40616 181 aaPredicted RBP8.15□□□□□ -1.1
CDH8-214ENST00000585315 KRT71Q3SY84 523 aa8.15□□□□□ -1.1
CDH8-214ENST00000585315 RAPGEF6Q8TEU7 1601 aa8.15□□□□□ -1.11
CDH8-214ENST00000585315 LUC7L3O95232 432 aaKnown RBP8.15□□□□□ -1.11
CDH8-214ENST00000585315 ATP6V1AP38606 617 aa8.15□□□□□ -1.11
CDH8-214ENST00000585315 DENND2CQ68D51 928 aa8.15□□□□□ -1.11
CDH8-214ENST00000585315 PNMA8AQ86V59 439 aaPredicted RBP8.15□□□□□ -1.11
CDH8-214ENST00000585315 TBC1D31Q96DN5 1066 aa8.15□□□□□ -1.11
CDH8-214ENST00000585315 OAS2P29728 719 aaKnown RBP8.15□□□□□ -1.11
CDH8-214ENST00000585315 DNM2P50570 870 aa8.15□□□□□ -1.11
CDH8-214ENST00000585315 RNF10Q8N5U6 811 aaKnown RBP8.15□□□□□ -1.11
CDH8-214ENST00000585315 GOLGA5Q8TBA6 731 aa8.15□□□□□ -1.11
CDH8-214ENST00000585315 FAM71BQ8TC56 605 aa8.15□□□□□ -1.11
CDH8-214ENST00000585315 PPP1R1BQ9UD71 204 aaPredicted RBP8.15□□□□□ -1.11
CDH8-214ENST00000585315 ZWINTO95229 277 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 SEC24BO95487 1268 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 ZNF853P0CG23 659 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDH8-214ENST00000585315 RIMS2Q9UQ26 1411 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 GIPC1O14908 333 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 RFC4P35249 363 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 PARP10Q53GL7 1025 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 SRGAP1Q7Z6B7 1085 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 ZNF274Q96GC6 653 aaPredicted RBP8.14□□□□□ -1.11
CDH8-214ENST00000585315 RUNDC3BQ96NL0 473 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 DSCC1Q9BVC3 393 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 FAM204AQ9H8W3 233 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 BCL2L12Q9HB09 334 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 HAUS2Q9NVX0 235 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 CHL1O00533 1208 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 TRIM37O94972 964 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 ANXA1P04083 346 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 ZNF518AQ6AHZ1 1483 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 BLMP54132 1417 aaPredicted RBP8.14□□□□□ -1.11
CDH8-214ENST00000585315 RPUSD2Q8IZ73 545 aaKnown RBP8.14□□□□□ -1.11
CDH8-214ENST00000585315 RAB3IPQ96QF0 476 aaPredicted RBP8.14□□□□□ -1.11
CDH8-214ENST00000585315 FNBP1Q96RU3 617 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 MAGEF1Q9HAY2 307 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 FAM114A2Q9NRY5 505 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 CCDC169A6NNP5 214 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
CDH8-214ENST00000585315 CEP85LQ5SZL2 805 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 PEX26Q7Z412 305 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 DCAF17Q5H9S7 520 aaPredicted RBP8.14□□□□□ -1.11
CDH8-214ENST00000585315 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 ZC3H12CQ9C0D7 883 aaKnown RBP8.14□□□□□ -1.11
CDH8-214ENST00000585315 KLHL14Q9P2G3 628 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 FAN1Q9Y2M0 1017 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 ASIC2Q16515 512 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 TTC38Q5R3I4 469 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 VPS16Q9H269 839 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 SNX14Q9Y5W7 946 aa8.14□□□□□ -1.11
CDH8-214ENST00000585315 GOLGA8KD6RF30 607 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 HSPA1LP34931 641 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 PPP1R12CQ9BZL4 782 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 LARSQ9P2J5 1176 aaKnown RBP8.13□□□□□ -1.11
CDH8-214ENST00000585315 ASIC3Q9UHC3 531 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 IQSEC3Q9UPP2 1182 aaPredicted RBP8.13□□□□□ -1.11
CDH8-214ENST00000585315 KLHL30Q0D2K2 578 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 MYSM1Q5VVJ2 828 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 MAGEB6Q8N7X4 407 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 TNRQ92752 1358 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 A2MP01023 1474 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 PUM3Q15397 648 aaKnown RBP8.13□□□□□ -1.11
CDH8-214ENST00000585315 SERPINA10Q9UK55 444 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 ABCC1P33527 1531 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 FAM135BQ49AJ0 1406 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 CCDC151A5D8V7 595 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 HHATQ5VTY9 493 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 DMRT2Q9Y5R5 561 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms