RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 PPATQ06203 517 aa22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 RRP1BQ14684 758 aaKnown RBP22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 SCYL3Q8IZE3 742 aa22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 BRI3BPQ8WY22 251 aa22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 LNPKQ9C0E8 428 aa22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 R3HDMLQ9H3Y0 253 aa22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 PI4KBQ9UBF8 816 aa22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 MYH7P12883 1935 aa22.57■■□□□ 1.2
PPP4R1-215ENST00000580182 CCL15-CCL14A0A0B4J2E2 113 aa22.56■■□□□ 1.2
PPP4R1-215ENST00000580182 GTF2A2P52657 109 aa22.56■■□□□ 1.2
PPP4R1-215ENST00000580182 PPIL2Q13356 520 aa22.56■■□□□ 1.2
PPP4R1-215ENST00000580182 UBE3CQ15386 1083 aa22.56■■□□□ 1.2
PPP4R1-215ENST00000580182 CCL15Q16663 113 aa22.56■■□□□ 1.2
PPP4R1-215ENST00000580182 KBTBD3Q8NAB2 608 aa22.56■■□□□ 1.2
PPP4R1-215ENST00000580182 DNAJC18Q9H819 358 aa22.56■■□□□ 1.2
PPP4R1-215ENST00000580182 MYH1P12882 1939 aa22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 ERC2O15083 957 aa22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 PRKAB2O43741 272 aa22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 CTNND1O60716 968 aaKnown RBP22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 GLRX3O76003 335 aaKnown RBP22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 MBD4O95243 580 aa22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 ZSCAN25Q6NSZ9 544 aa22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 CCDC84Q86UT8 332 aaPredicted RBP22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 SDR42E1Q8WUS8 393 aa22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 PUS7LQ9H0K6 701 aaKnown RBP22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 CASP8AP2Q9UKL3 1982 aa22.55■■□□□ 1.2
PPP4R1-215ENST00000580182 PTPRAP18433 802 aa22.54■■□□□ 1.2
PPP4R1-215ENST00000580182 CRNKL1Q9BZJ0 848 aaKnown RBP22.54■■□□□ 1.2
PPP4R1-215ENST00000580182 HERC5Q9UII4 1024 aaKnown RBP22.54■■□□□ 1.2
PPP4R1-215ENST00000580182 PDE1AP54750 535 aa22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 EVX2Q03828 476 aa22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 SNAPC2Q13487 334 aa22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 METTL16Q86W50 562 aaKnown RBP22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 FOXP4Q8IVH2 680 aaPredicted RBP22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 PICK1Q9NRD5 415 aa22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 STAP2Q9UGK3 403 aa22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 ZHX2Q9Y6X8 837 aa22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 DOCK1Q14185 1865 aa22.53■■□□□ 1.2
PPP4R1-215ENST00000580182 ALDH1A1P00352 501 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 JAG1P78504 1218 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 NUCB1Q02818 461 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 TNS4Q8IZW8 715 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 FAM43AQ8N2R8 423 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 DCP1AQ9NPI6 582 aaPredicted RBP22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 KCNH4Q9UQ05 1017 aa22.52■■□□□ 1.2
PPP4R1-215ENST00000580182 NAV1Q8NEY1 1877 aa22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 DDX60LQ5H9U9 1706 aaKnown RBP22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 RNF113AO15541 343 aaKnown RBP22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 CETPP11597 493 aa22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 CAP2P40123 477 aa22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 PLCD1P51178 756 aa22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 SHROOM1Q2M3G4 852 aaPredicted RBP22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 OSBP2Q969R2 916 aa22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 CFHR5Q9BXR6 569 aa22.51■■□□□ 1.19
PPP4R1-215ENST00000580182 BTBD19C9JJ37 291 aa22.5■■□□□ 1.19
PPP4R1-215ENST00000580182 OTUD7BQ6GQQ9 843 aa22.5■■□□□ 1.19
PPP4R1-215ENST00000580182 TRIM34Q9BYJ4 488 aa22.5■■□□□ 1.19
PPP4R1-215ENST00000580182 MCM9Q9NXL9 1143 aa22.5■■□□□ 1.19
PPP4R1-215ENST00000580182 AFG3L2Q9Y4W6 797 aa22.5■■□□□ 1.19
PPP4R1-215ENST00000580182 GPR25O00155 361 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 GDF11O95390 407 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 POLR3DP05423 398 aaPredicted RBP22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 CYP2D6P10635 497 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 CRHR2Q13324 411 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 MOGSQ13724 837 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 TTC6Q86TZ1 520 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 FSD1Q9BTV5 496 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 SLC4A4Q9Y6R1 1079 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 PHIPQ8WWQ0 1821 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 ATAD5Q96QE3 1844 aa22.49■■□□□ 1.19
PPP4R1-215ENST00000580182 ZNF296Q8WUU4 475 aaPredicted RBP22.48■■□□□ 1.19
PPP4R1-215ENST00000580182 APPBP2Q92624 585 aa22.48■■□□□ 1.19
PPP4R1-215ENST00000580182 EHD4Q9H223 541 aa22.48■■□□□ 1.19
PPP4R1-215ENST00000580182 SERPINB13Q9UIV8 391 aa22.48■■□□□ 1.19
PPP4R1-215ENST00000580182 TRIM75PA6NK02 468 aa22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 SMIM22K7EJ46 135 aa22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 M0R2C6 588 aa22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 CXCL11O14625 94 aa22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 ZFYP08048 801 aaPredicted RBP22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 PLEKHM2Q8IWE5 1019 aa22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 STRBPQ96SI9 672 aaKnown RBP22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 SEC62Q99442 399 aaKnown RBP22.47■■□□□ 1.19
PPP4R1-215ENST00000580182 TAF1CQ15572 869 aaPredicted RBP22.46■■□□□ 1.19
PPP4R1-215ENST00000580182 ATP8A2Q9NTI2 1148 aa22.46■■□□□ 1.19
PPP4R1-215ENST00000580182 BAZ2AQ9UIF9 1905 aaKnown RBP22.45■■□□□ 1.18
PPP4R1-215ENST00000580182 CYP2D7A0A087X1C5 515 aa22.45■■□□□ 1.18
PPP4R1-215ENST00000580182 A0A0G2JLL6 359 aaPredicted RBP22.45■■□□□ 1.18
PPP4R1-215ENST00000580182 TATDN1Q6P1N9 297 aa22.45■■□□□ 1.18
PPP4R1-215ENST00000580182 PRRT2Q7Z6L0 340 aaPredicted RBP22.45■■□□□ 1.18
PPP4R1-215ENST00000580182 GPAA1O43292 621 aa22.44■■□□□ 1.18
PPP4R1-215ENST00000580182 SHMT1P34896 483 aa22.44■■□□□ 1.18
PPP4R1-215ENST00000580182 GABPAQ06546 454 aa22.44■■□□□ 1.18
PPP4R1-215ENST00000580182 SPP2Q13103 211 aa22.44■■□□□ 1.18
PPP4R1-215ENST00000580182 GPAT2Q6NUI2 795 aa22.44■■□□□ 1.18
PPP4R1-215ENST00000580182 EVI5LQ96CN4 794 aa22.44■■□□□ 1.18
PPP4R1-215ENST00000580182 DYNLL2Q96FJ2 89 aa22.44■■□□□ 1.18
PPP4R1-215ENST00000580182 USP17L5A8MUK1 530 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms