RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 ZNF296Q8WUU4 475 aaPredicted RBP31.96■■■□□ 2.71
PPP4R1-204ENST00000577393 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.96■■■□□ 2.71
PPP4R1-204ENST00000577393 HERC5Q9UII4 1024 aaKnown RBP31.96■■■□□ 2.71
PPP4R1-204ENST00000577393 KCNH4Q9UQ05 1017 aa31.96■■■□□ 2.71
PPP4R1-204ENST00000577393 PTPRAP18433 802 aa31.95■■■□□ 2.71
PPP4R1-204ENST00000577393 SLFNL1Q499Z3 407 aa31.95■■■□□ 2.71
PPP4R1-204ENST00000577393 GCC1Q96CN9 775 aa31.95■■■□□ 2.71
PPP4R1-204ENST00000577393 ANKRD45Q5TZF3 282 aa31.94■■■□□ 2.7
PPP4R1-204ENST00000577393 FAM43AQ8N2R8 423 aa31.94■■■□□ 2.7
PPP4R1-204ENST00000577393 OTUD7AQ8TE49 926 aaPredicted RBP31.94■■■□□ 2.7
PPP4R1-204ENST00000577393 ZHX2Q9Y6X8 837 aa31.94■■■□□ 2.7
PPP4R1-204ENST00000577393 CRHR2Q13324 411 aa31.93■■■□□ 2.7
PPP4R1-204ENST00000577393 FOXP4Q8IVH2 680 aaPredicted RBP31.93■■■□□ 2.7
PPP4R1-204ENST00000577393 SIPA1L1O43166 1804 aa31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 BTBD19C9JJ37 291 aa31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 CHGBP05060 677 aa31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 HLA-DOAP06340 250 aa31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 DGKZQ13574 1117 aa31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 RRP1BQ14684 758 aaKnown RBP31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 SLC4A8Q2Y0W8 1093 aa31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 METTL16Q86W50 562 aaKnown RBP31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 ZBTB47Q9UFB7 747 aaPredicted RBP31.92■■■□□ 2.7
PPP4R1-204ENST00000577393 CXCL11O14625 94 aa31.91■■■□□ 2.7
PPP4R1-204ENST00000577393 LCORLQ8N3X6 602 aa31.91■■■□□ 2.7
PPP4R1-204ENST00000577393 CRACR2BQ8N4Y2 399 aaPredicted RBP31.91■■■□□ 2.7
PPP4R1-204ENST00000577393 CRNKL1Q9BZJ0 848 aaKnown RBP31.91■■■□□ 2.7
PPP4R1-204ENST00000577393 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.91■■■□□ 2.7
PPP4R1-204ENST00000577393 TTC41PQ6P2S7 1318 aa31.91■■■□□ 2.7
PPP4R1-204ENST00000577393 DOCK1Q14185 1865 aa31.91■■■□□ 2.7
PPP4R1-204ENST00000577393 FKTNO75072 461 aa31.9■■■□□ 2.7
PPP4R1-204ENST00000577393 CAP2P40123 477 aa31.9■■■□□ 2.7
PPP4R1-204ENST00000577393 UBE3CQ15386 1083 aa31.9■■■□□ 2.7
PPP4R1-204ENST00000577393 TAF1CQ15572 869 aaPredicted RBP31.9■■■□□ 2.7
PPP4R1-204ENST00000577393 MCOLN1Q9GZU1 580 aa31.9■■■□□ 2.7
PPP4R1-204ENST00000577393 DNAJC18Q9H819 358 aa31.9■■■□□ 2.7
PPP4R1-204ENST00000577393 AFG3L2Q9Y4W6 797 aa31.9■■■□□ 2.7
PPP4R1-204ENST00000577393 MYH1P12882 1939 aa31.89■■■□□ 2.7
PPP4R1-204ENST00000577393 ZSCAN25Q6NSZ9 544 aa31.89■■■□□ 2.7
PPP4R1-204ENST00000577393 CCDC84Q86UT8 332 aaPredicted RBP31.89■■■□□ 2.7
PPP4R1-204ENST00000577393 TRIM34Q9BYJ4 488 aa31.89■■■□□ 2.7
PPP4R1-204ENST00000577393 RWDD1Q9H446 243 aaPredicted RBP31.89■■■□□ 2.7
PPP4R1-204ENST00000577393 ARMT1Q9H993 441 aa31.89■■■□□ 2.7
PPP4R1-204ENST00000577393 MOGSQ13724 837 aa31.88■■■□□ 2.69
PPP4R1-204ENST00000577393 KBTBD3Q8NAB2 608 aa31.88■■■□□ 2.69
PPP4R1-204ENST00000577393 PI4K2BQ8TCG2 481 aa31.88■■■□□ 2.69
PPP4R1-204ENST00000577393 ZCCHC17Q9NP64 241 aaKnown RBP31.88■■■□□ 2.69
PPP4R1-204ENST00000577393 ERC2O15083 957 aa31.87■■■□□ 2.69
PPP4R1-204ENST00000577393 MBD4O95243 580 aa31.87■■■□□ 2.69
PPP4R1-204ENST00000577393 MX1P20591 662 aa31.87■■■□□ 2.69
PPP4R1-204ENST00000577393 CTU1Q7Z7A3 348 aaKnown RBP31.87■■■□□ 2.69
PPP4R1-204ENST00000577393 ZFYVE28Q9HCC9 887 aa31.87■■■□□ 2.69
PPP4R1-204ENST00000577393 MYH7P12883 1935 aa31.87■■■□□ 2.69
PPP4R1-204ENST00000577393 CAPN15O75808 1086 aa31.86■■■□□ 2.69
PPP4R1-204ENST00000577393 TTC6Q86TZ1 520 aa31.86■■■□□ 2.69
PPP4R1-204ENST00000577393 SDR42E1Q8WUS8 393 aa31.86■■■□□ 2.69
PPP4R1-204ENST00000577393 ABHD8Q96I13 439 aa31.86■■■□□ 2.69
PPP4R1-204ENST00000577393 SALL3Q9BXA9 1300 aa31.85■■■□□ 2.69
PPP4R1-204ENST00000577393 GLRX3O76003 335 aaKnown RBP31.85■■■□□ 2.69
PPP4R1-204ENST00000577393 ANKRD23Q86SG2 305 aa31.85■■■□□ 2.69
PPP4R1-204ENST00000577393 A0A0G2JLL6 359 aaPredicted RBP31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 TRIM75PA6NK02 468 aa31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 IGHDP01880 384 aa31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 PRRT2Q7Z6L0 340 aaPredicted RBP31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 SMC5Q8IY18 1101 aa31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 EHD4Q9H223 541 aa31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 DCP1AQ9NPI6 582 aaPredicted RBP31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 PHIPQ8WWQ0 1821 aa31.84■■■□□ 2.69
PPP4R1-204ENST00000577393 PRKAB2O43741 272 aa31.83■■■□□ 2.69
PPP4R1-204ENST00000577393 POLR3DP05423 398 aaPredicted RBP31.83■■■□□ 2.69
PPP4R1-204ENST00000577393 PLCD1P51178 756 aa31.83■■■□□ 2.69
PPP4R1-204ENST00000577393 PUS7LQ9H0K6 701 aaKnown RBP31.83■■■□□ 2.69
PPP4R1-204ENST00000577393 MCM9Q9NXL9 1143 aa31.83■■■□□ 2.69
PPP4R1-204ENST00000577393 SERPINB13Q9UIV8 391 aa31.83■■■□□ 2.69
PPP4R1-204ENST00000577393 ATAD5Q96QE3 1844 aa31.82■■■□□ 2.68
PPP4R1-204ENST00000577393 PDHXO00330 501 aa31.82■■■□□ 2.68
PPP4R1-204ENST00000577393 IRX6P78412 446 aaPredicted RBP31.82■■■□□ 2.68
PPP4R1-204ENST00000577393 JAG1P78504 1218 aa31.82■■■□□ 2.68
PPP4R1-204ENST00000577393 GPAT2Q6NUI2 795 aa31.82■■■□□ 2.68
PPP4R1-204ENST00000577393 FASTKD5Q7L8L6 764 aaKnown RBP31.82■■■□□ 2.68
PPP4R1-204ENST00000577393 USP17L5A8MUK1 530 aa31.81■■■□□ 2.68
PPP4R1-204ENST00000577393 GDF11O95390 407 aa31.81■■■□□ 2.68
PPP4R1-204ENST00000577393 NAV1Q8NEY1 1877 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 RNF113AO15541 343 aaKnown RBP31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 ASNSP08243 561 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 SP3Q02447 781 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 SPP2Q13103 211 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 SHROOM1Q2M3G4 852 aaPredicted RBP31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 GADL1Q6ZQY3 521 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 ZNF280CQ8ND82 737 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 TBC1D2Q9BYX2 928 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 ATP8A2Q9NTI2 1148 aa31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 DDX60LQ5H9U9 1706 aaKnown RBP31.8■■■□□ 2.68
PPP4R1-204ENST00000577393 TLR2O60603 784 aa31.79■■■□□ 2.68
PPP4R1-204ENST00000577393 B4GALNT3Q6L9W6 998 aa31.79■■■□□ 2.68
PPP4R1-204ENST00000577393 TATDN1Q6P1N9 297 aa31.79■■■□□ 2.68
PPP4R1-204ENST00000577393 LNPKQ9C0E8 428 aa31.79■■■□□ 2.68
PPP4R1-204ENST00000577393 GINM1Q9NU53 330 aa31.79■■■□□ 2.68
PPP4R1-204ENST00000577393 STAP2Q9UGK3 403 aa31.79■■■□□ 2.68
PPP4R1-204ENST00000577393 ZFYP08048 801 aaPredicted RBP31.78■■■□□ 2.68
PPP4R1-204ENST00000577393 EVX2Q03828 476 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms