RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TTC9Q92623 222 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 GGT7Q9UJ14 662 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 DDX41Q9UJV9 622 aaKnown RBP7.95□□□□□ -1.14
SF3B3-214ENST00000572365 GDF2Q9UK05 429 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-214ENST00000572365 AKAP2Q9Y2D5 859 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 LAMC1P11047 1609 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 E9PCH4 1651 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 DAPK1P53355 1430 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 KRT76Q01546 638 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 NBPF8Q3BBV2 869 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 CEP135Q66GS9 1140 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 ELMSAN1Q6PJG2 1045 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 SV2BQ7L1I2 683 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 BSNDQ8WZ55 320 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 LPIN3Q9BQK8 851 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 ZNF576Q9H609 170 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 SRA1Q9HD15 236 aaKnown RBP7.94□□□□□ -1.14
SF3B3-214ENST00000572365 SPATA31A3Q5VYP0 1347 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 ANKRD30AQ9BXX3 1397 aa7.94□□□□□ -1.14
SF3B3-214ENST00000572365 PTPN23Q9H3S7 1636 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 FAM50AQ14320 339 aaKnown RBP7.93□□□□□ -1.14
SF3B3-214ENST00000572365 CCDC85BQ15834 202 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-214ENST00000572365 ZNF394Q53GI3 561 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 NAALADL2Q58DX5 795 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 USP48Q86UV5 1035 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 ASAP3Q8TDY4 903 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 IRF7Q92985 503 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 RSRP1Q9BUV0 290 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 CEP44Q9C0F1 390 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 ADAM19Q9H013 955 aa7.93□□□□□ -1.14
SF3B3-214ENST00000572365 SMG9Q9H0W8 520 aaKnown RBP7.93□□□□□ -1.14
SF3B3-214ENST00000572365 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-214ENST00000572365 EPXP11678 715 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 PTPRAP18433 802 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 RACK1P63244 317 aaKnown RBP7.92□□□□□ -1.14
SF3B3-214ENST00000572365 PSAPL1Q6NUJ1 521 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 ADAMTSL4Q6UY14 1074 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 ZNF654Q8IZM8 581 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 MICALL1Q8N3F8 863 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 MUC3BQ9H195 1237 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 CCSER2Q9H7U1 834 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 SOX13Q9UN79 622 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 USP32Q8NFA0 1604 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 NUP188Q5SRE5 1749 aa7.92□□□□□ -1.14
SF3B3-214ENST00000572365 FBXO24O75426 580 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 RLBP1P12271 317 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 ALAS2P22557 587 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 ACDQ96AP0 544 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 SYT17Q9BSW7 474 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 CLEC4MQ9H2X3 399 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-214ENST00000572365 COPRSQ9NQ92 184 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 SEC31BQ9NQW1 1179 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 TRIM33Q9UPN9 1127 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 STARD13Q9Y3M8 1113 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 PCDHGB7Q9Y5F8 929 aa7.91□□□□□ -1.14
SF3B3-214ENST00000572365 ENC1O14682 589 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 FAAP100Q0VG06 881 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 PWP1Q13610 501 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 CHRNA2Q15822 529 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 TPTE2Q6XPS3 522 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 C20orf204Q6ZNR8 217 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 FAM196AQ6ZSG2 479 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 PTF1AQ7RTS3 328 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 VN1R5Q7Z5H4 357 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 CACTIN-AS1Q8N1I8 211 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 PMFBP1Q8TBY8 1022 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 NECAB3Q96P71 396 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-214ENST00000572365 TINF2Q9BSI4 451 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 ACBD3Q9H3P7 528 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 KBTBD4Q9NVX7 518 aa7.9□□□□□ -1.14
SF3B3-214ENST00000572365 KAT6BQ8WYB5 2073 aa7.9□□□□□ -1.15
SF3B3-214ENST00000572365 MYOM1P52179 1685 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 RPRD2Q5VT52 1461 aaKnown RBP7.89□□□□□ -1.15
SF3B3-214ENST00000572365 NINLQ9Y2I6 1382 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 IGSF3O75054 1194 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 RGS9O75916 674 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-214ENST00000572365 SLURP2P0DP57 97 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 GPR162Q16538 588 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 KANK3Q6NY19 840 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 C1orf229Q6ZS94 237 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-214ENST00000572365 TRIM56Q9BRZ2 755 aaKnown RBP7.89□□□□□ -1.15
SF3B3-214ENST00000572365 LRRC4BQ9NT99 713 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 NWD2Q9ULI1 1742 aa7.89□□□□□ -1.15
SF3B3-214ENST00000572365 NRKQ7Z2Y5 1582 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 ADGRL2O95490 1459 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 ANKRD50Q9ULJ7 1429 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 SPATA31A5Q5VU36 1347 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 SPATA31A7Q8IWB4 1347 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 LOC105371045A0A1W2PR82 267 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 B3GALT4O96024 378 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 CELA3AP09093 270 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 PCDH1Q08174 1060 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 SAFB2Q14151 953 aaKnown RBP eCLIP7.88□□□□□ -1.15
SF3B3-214ENST00000572365 GRIK5Q16478 980 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 TMEM132EQ6IEE7 984 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 SLC43A3Q8NBI5 491 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 TMEM74Q96NL1 305 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 LACRTQ9GZZ8 138 aa7.88□□□□□ -1.15
SF3B3-214ENST00000572365 TMEM39AQ9NV64 488 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms