RNA–Protein interactions for RNA: ENST00000570514.5

TRAP1-204, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-204ENST00000570514 PRC1O43663 620 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 YBX3P16989 372 aaKnown RBP eCLIP11.5□□□□□ -0.575e-9■□□□□ 10.4
TRAP1-204ENST00000570514 GMPSP49915 693 aaPredicted RBP11.5□□□□□ -0.57
TRAP1-204ENST00000570514 AK2P54819 239 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 SYNE3Q6ZMZ3 975 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 STOX1Q6ZVD7 989 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 SGMS1Q86VZ5 419 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 APOBEC3FQ8IUX4 373 aaKnown RBP11.5□□□□□ -0.57
TRAP1-204ENST00000570514 MAPKAPK5Q8IW41 473 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 FAM151AQ8WW52 585 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 MXD3Q9BW11 206 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 TCP11L1Q9NUJ3 509 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 GPRC5DQ9NZD1 345 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 CNOT7Q9UIV1 285 aaKnown RBP11.5□□□□□ -0.57
TRAP1-204ENST00000570514 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
TRAP1-204ENST00000570514 PITPNM2Q9BZ72 1349 aa11.5□□□□□ -0.57
TRAP1-204ENST00000570514 CCDC196A0A1B0GTZ2 297 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 IQCA1LA6NCM1 817 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 CALM1P0DP23 149 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 CALM2P0DP24 149 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 CALM3P0DP25 149 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 CUL4AQ13619 759 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 CPLX2Q6PUV4 134 aaKnown RBP11.49□□□□□ -0.57
TRAP1-204ENST00000570514 METTL16Q86W50 562 aaKnown RBP11.49□□□□□ -0.57
TRAP1-204ENST00000570514 DGKHQ86XP1 1220 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 MICALL2Q8IY33 904 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 RGS22Q8NE09 1264 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
TRAP1-204ENST00000570514 PRMT6Q96LA8 375 aaPredicted RBP11.49□□□□□ -0.57
TRAP1-204ENST00000570514 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
TRAP1-204ENST00000570514 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 TOMM22Q9NS69 142 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
TRAP1-204ENST00000570514 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 GJA3Q9Y6H8 435 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 ECM29Q5VYK3 1845 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 SBF1O95248 1867 aa11.49□□□□□ -0.57
TRAP1-204ENST00000570514 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 WNT10BO00744 389 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 TBC1D12O60347 775 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 KDM4AO75164 1064 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 CDKL5O76039 1030 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 GABPAQ06546 454 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 Q6ZUG5 572 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 ZC3H15Q8WU90 426 aaKnown RBP11.48□□□□□ -0.57
TRAP1-204ENST00000570514 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 TDRD3Q9H7E2 651 aaKnown RBP11.48□□□□□ -0.57
TRAP1-204ENST00000570514 ADARB2Q9NS39 739 aaKnown RBP11.48□□□□□ -0.57
TRAP1-204ENST00000570514 ZSWIM5Q9P217 1185 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
TRAP1-204ENST00000570514 PLIN4Q96Q06 1357 aa11.48□□□□□ -0.57
TRAP1-204ENST00000570514 NEDD4P46934 1319 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 ZNF541Q9H0D2 1346 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 B4E1Z4 1266 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 SH2B2O14492 632 aaPredicted RBP11.47□□□□□ -0.57
TRAP1-204ENST00000570514 IFIT3O14879 490 aaKnown RBP11.47□□□□□ -0.57
TRAP1-204ENST00000570514 RANBP6O60518 1105 aaKnown RBP11.47□□□□□ -0.57
TRAP1-204ENST00000570514 TSPY3P0CV98 308 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 TSPY8P0CW00 308 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 PRELPP51888 382 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 PICALMQ13492 652 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 WTAPQ15007 396 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 TMEM67Q5HYA8 995 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 ZSCAN29Q8IWY8 852 aaPredicted RBP11.47□□□□□ -0.57
TRAP1-204ENST00000570514 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
TRAP1-204ENST00000570514 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
TRAP1-204ENST00000570514 MAP3K14Q99558 947 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 SLKQ9H2G2 1235 aaPredicted RBP11.47□□□□□ -0.57
TRAP1-204ENST00000570514 FAM198AQ9UFP1 575 aa11.47□□□□□ -0.57
TRAP1-204ENST00000570514 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 NID2Q14112 1375 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 CCDC69A6NI79 296 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 PFKFB2O60825 505 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 DDAH1O94760 285 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 PDCP20941 246 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 CDK8P49336 464 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 HMGN5P82970 282 aaKnown RBP11.46□□□□□ -0.57
TRAP1-204ENST00000570514 TOB2Q14106 344 aaPredicted RBP11.46□□□□□ -0.57
TRAP1-204ENST00000570514 RRP12Q5JTH9 1297 aaKnown RBP11.46□□□□□ -0.57
TRAP1-204ENST00000570514 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
TRAP1-204ENST00000570514 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 IGDCC4Q8TDY8 1250 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 BRF1Q92994 677 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 DDX4Q9NQI0 724 aaKnown RBP11.46□□□□□ -0.57
TRAP1-204ENST00000570514 SLC12A7Q9Y666 1083 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 TAF6LQ9Y6J9 622 aa11.46□□□□□ -0.57
TRAP1-204ENST00000570514 MYH1P12882 1939 aa11.46□□□□□ -0.58
TRAP1-204ENST00000570514 BAZ2AQ9UIF9 1905 aaKnown RBP11.46□□□□□ -0.58
TRAP1-204ENST00000570514 GLTPD2A6NH11 291 aa11.45□□□□□ -0.58
TRAP1-204ENST00000570514 PLCD1P51178 756 aa11.45□□□□□ -0.58
TRAP1-204ENST00000570514 NUCB2P80303 420 aa11.45□□□□□ -0.58
TRAP1-204ENST00000570514 MAP3K10Q02779 954 aa11.45□□□□□ -0.58
TRAP1-204ENST00000570514 NFIAQ12857 509 aa11.45□□□□□ -0.58
TRAP1-204ENST00000570514 IFIT1BQ5T764 474 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms