RNA–Protein interactions for RNA: ENST00000567306.5

PDXDC1-215, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-215ENST00000567306 MCM9Q9NXL9 1143 aa8.83□□□□□ -1
PDXDC1-215ENST00000567306 SAP30BPQ9UHR5 308 aaKnown RBP8.83□□□□□ -1
PDXDC1-215ENST00000567306 SERPINA10Q9UK55 444 aa8.83□□□□□ -1
PDXDC1-215ENST00000567306 TPCN1Q9ULQ1 816 aa8.83□□□□□ -1
PDXDC1-215ENST00000567306 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.83□□□□□ -1
PDXDC1-215ENST00000567306 SHTN1A0MZ66 631 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 FZD9O00144 591 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 GALR2O43603 387 aaPredicted RBP8.82□□□□□ -1
PDXDC1-215ENST00000567306 KDM4AO75164 1064 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 MCM5P33992 734 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 DDIT3P35638 169 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 RBM5P52756 815 aaKnown RBP eCLIP8.82□□□□□ -1
PDXDC1-215ENST00000567306 CACNB3P54284 484 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 NFIAQ12857 509 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 CUL4AQ13619 759 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 ME3Q16798 604 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 RRP12Q5JTH9 1297 aaKnown RBP8.82□□□□□ -1
PDXDC1-215ENST00000567306 C12orf60Q5U649 245 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 CIAPIN1Q6FI81 312 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 MFSD6Q6ZSS7 791 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 BRF1Q92994 677 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 MRIQ9BWK5 157 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 AGXT2Q9BYV1 514 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 USP40Q9NVE5 1235 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 PCDHB8Q9UN66 801 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 LIMCH1Q9UPQ0 1083 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 SIPA1L1O43166 1804 aa8.82□□□□□ -1
PDXDC1-215ENST00000567306 WDR19Q8NEZ3 1342 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 SH2B2O14492 632 aaPredicted RBP8.81□□□□□ -1
PDXDC1-215ENST00000567306 PRDM1O75626 825 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 FGRP09769 529 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 PLCD1P51178 756 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 APOBRQ0VD83 1088 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 TRDNQ13061 729 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 ANKRD1Q15327 319 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 ARHGAP27Q6ZUM4 889 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 NECAB1Q8N987 351 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 SLC44A5Q8NCS7 719 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 AGBL3Q8NEM8 1001 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 DYNLL2Q96FJ2 89 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 OSBPL5Q9H0X9 879 aaPredicted RBP8.81□□□□□ -1
PDXDC1-215ENST00000567306 RNF41Q9H4P4 317 aaPredicted RBP8.81□□□□□ -1
PDXDC1-215ENST00000567306 CNNM2Q9H8M5 875 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 SENP2Q9HC62 589 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
PDXDC1-215ENST00000567306 TOMM22Q9NS69 142 aa8.81□□□□□ -1
PDXDC1-215ENST00000567306 MYH1P12882 1939 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 ORC4O43929 436 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 DTNBO60941 627 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 POLR3DP05423 398 aaPredicted RBP8.8□□□□□ -1
PDXDC1-215ENST00000567306 HSP90AA1P07900 732 aaKnown RBP8.8□□□□□ -1
PDXDC1-215ENST00000567306 LMNB1P20700 586 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 GMPSP49915 693 aaPredicted RBP8.8□□□□□ -1
PDXDC1-215ENST00000567306 FGD1P98174 961 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 CCDC83Q8IWF9 413 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 ZFPM1Q8IX07 1006 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 FBXL16Q8N461 479 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 PRMT6Q96LA8 375 aaPredicted RBP8.8□□□□□ -1
PDXDC1-215ENST00000567306 ZKSCAN3Q9BRR0 538 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 KRT23Q9C075 422 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 LY9Q9HBG7 655 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 SH2B1Q9NRF2 756 aaPredicted RBP8.8□□□□□ -1
PDXDC1-215ENST00000567306 FAM198AQ9UFP1 575 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
PDXDC1-215ENST00000567306 DICER1Q9UPY3 1922 aaKnown RBP8.8□□□□□ -1
PDXDC1-215ENST00000567306 SBF1O95248 1867 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 COL2A1P02458 1487 aaPredicted RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 KLF18A0A0U1RQI7 1052 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 CLRN2A0PK11 232 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 GOLGA8BA8MQT2 603 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 SLC3A2P08195 630 aaKnown RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 CHRM1P11229 460 aaPredicted RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 PCP11498 1178 aaKnown RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 RPS12P25398 132 aaKnown RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 CLCN6P51797 869 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 EIF6P56537 245 aaKnown RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 ZNF280AP59817 542 aaPredicted RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 STK3Q13188 491 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 TNIP1Q15025 636 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 TMEM67Q5HYA8 995 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 C16orf86Q6ZW13 317 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 RAB11FIP4Q86YS3 637 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 IFNL1Q8IU54 200 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 AMOTL1Q8IY63 956 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 IGDCC4Q8TDY8 1250 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 ESR2Q92731 530 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 GTF3C6Q969F1 213 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 INTS4Q96HW7 963 aaKnown RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 ZBED3Q96IU2 234 aaPredicted RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 ZSCAN31Q96LW9 406 aaPredicted RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 IDI2Q9BXS1 227 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 TDRD3Q9H7E2 651 aaKnown RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 ZSWIM5Q9P217 1185 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 HDAC9Q9UKV0 1011 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
PDXDC1-215ENST00000567306 GJA3Q9Y6H8 435 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 TNKSO95271 1327 aa8.79□□□□□ -1
PDXDC1-215ENST00000567306 CNTNAP1P78357 1384 aa8.78□□□□□ -1
PDXDC1-215ENST00000567306 IFIT3O14879 490 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms