RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 FAM83AQ86UY5 434 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 MAPKAPK5Q8IW41 473 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 SMC1BQ8NDV3 1235 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 TGFBRAP1Q8WUH2 860 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 SDR42E1Q8WUS8 393 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 RUFY2Q8WXA3 655 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 STRBPQ96SI9 672 aaKnown RBP13.76□□□□□ -0.21
KARS-207ENST00000566560 GLIS2Q9BZE0 524 aaPredicted RBP13.76□□□□□ -0.21
KARS-207ENST00000566560 DDX4Q9NQI0 724 aaKnown RBP13.76□□□□□ -0.21
KARS-207ENST00000566560 FAM198AQ9UFP1 575 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 SIPA1L1O43166 1804 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 LAMA4Q16363 1823 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 PRKAB2O43741 272 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 ENTPD3O75355 529 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 TOMM70O94826 608 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 GNAT2P19087 354 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
KARS-207ENST00000566560 RASA3Q14644 834 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 CDC37L1Q7L3B6 337 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 RBM46Q8TBY0 533 aaKnown RBP13.75□□□□□ -0.21
KARS-207ENST00000566560 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 OSBPL5Q9H0X9 879 aaPredicted RBP13.75□□□□□ -0.21
KARS-207ENST00000566560 DEFB129Q9H1M3 183 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 METRNQ9UJH8 293 aa13.75□□□□□ -0.21
KARS-207ENST00000566560 ATRNL1Q5VV63 1379 aa13.74□□□□□ -0.21
KARS-207ENST00000566560 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
KARS-207ENST00000566560 FAM151AQ8WW52 585 aa13.74□□□□□ -0.21
KARS-207ENST00000566560 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
KARS-207ENST00000566560 IL25Q9H293 177 aa13.74□□□□□ -0.21
KARS-207ENST00000566560 SSC5DA1L4H1 1573 aa13.74□□□□□ -0.21
KARS-207ENST00000566560 MYH8P13535 1937 aa13.73□□□□□ -0.21
KARS-207ENST00000566560 TRAF5O00463 557 aa13.73□□□□□ -0.21
KARS-207ENST00000566560 SGSM2O43147 1006 aa13.73□□□□□ -0.21
KARS-207ENST00000566560 ZSCAN29Q8IWY8 852 aaPredicted RBP13.73□□□□□ -0.21
KARS-207ENST00000566560 CDAN1Q8IWY9 1227 aa13.73□□□□□ -0.21
KARS-207ENST00000566560 CDCA5Q96FF9 252 aa13.73□□□□□ -0.21
KARS-207ENST00000566560 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
KARS-207ENST00000566560 DCP1AQ9NPI6 582 aaPredicted RBP13.73□□□□□ -0.21
KARS-207ENST00000566560 SAP30BPQ9UHR5 308 aaKnown RBP13.73□□□□□ -0.21
KARS-207ENST00000566560 PAPPA2Q9BXP8 1791 aa13.73□□□□□ -0.21
KARS-207ENST00000566560 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 APPP05067 770 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 TDO2P48775 406 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 SLC4A8Q2Y0W8 1093 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 PRAMEF18Q5VWM3 479 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 ESYT1Q9BSJ8 1104 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 NACAP1Q9BZK3 213 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 ATP8A2Q9NTI2 1148 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 MCM9Q9NXL9 1143 aa13.72□□□□□ -0.21
KARS-207ENST00000566560 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
KARS-207ENST00000566560 GSG1L2A8MUP6 293 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 HLA-DOAP06340 250 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 NF2P35240 595 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 FSTL1Q12841 308 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 DLK2Q6UY11 383 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 SH3BP5LQ7L8J4 393 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 TEPSINQ96N21 525 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 NAPBQ9H115 298 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 ARPP21Q9UBL0 812 aaPredicted RBP13.71□□□□□ -0.21
KARS-207ENST00000566560 MKRN1Q9UHC7 482 aaKnown RBP13.71□□□□□ -0.21
KARS-207ENST00000566560 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
KARS-207ENST00000566560 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
KARS-207ENST00000566560 DDTLA6NHG4 134 aaPredicted RBP13.7□□□□□ -0.22
KARS-207ENST00000566560 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
KARS-207ENST00000566560 FOXP2O15409 715 aa13.7□□□□□ -0.22
KARS-207ENST00000566560 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
KARS-207ENST00000566560 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
KARS-207ENST00000566560 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
KARS-207ENST00000566560 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
KARS-207ENST00000566560 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
KARS-207ENST00000566560 HOOK2Q96ED9 719 aa13.7□□□□□ -0.22
KARS-207ENST00000566560 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
KARS-207ENST00000566560 PASKQ96RG2 1323 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 POLR3DP05423 398 aaPredicted RBP13.69□□□□□ -0.22
KARS-207ENST00000566560 CYP2D6P10635 497 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 FMR1Q06787 632 aaKnown RBP eCLIP13.69□□□□□ -0.22
KARS-207ENST00000566560 SUPT20HL1Q3ZLR7 823 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 DSCC1Q9BVC3 393 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 ANO2Q9NQ90 1003 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
KARS-207ENST00000566560 DOCK1Q14185 1865 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 CYP2D7A0A087X1C5 515 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 USP17L21D6R901 530 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 CELF2O95319 508 aaKnown RBP13.68□□□□□ -0.22
KARS-207ENST00000566560 DCAF15Q66K64 600 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 TTC6Q86TZ1 520 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
KARS-207ENST00000566560 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 PI4KBQ9UBF8 816 aa13.68□□□□□ -0.22
KARS-207ENST00000566560 ROBO3Q96MS0 1386 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms