RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FAM196BA6NMK8 535 aa22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 PTPRAP18433 802 aa22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 CRHR2Q13324 411 aa22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 TRIM34Q9BYJ4 488 aa22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 DOCK1Q14185 1865 aa22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 ZNF532Q9HCE3 1301 aa22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 MYH1P12882 1939 aa22.23■■□□□ 1.15
SYNGR3-204ENST00000564642 HLA-DOAP06340 250 aa22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 AAMPQ13685 434 aa22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 TAF1CQ15572 869 aaPredicted RBP22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 CTU1Q7Z7A3 348 aaKnown RBP22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 FOXP4Q8IVH2 680 aaPredicted RBP22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 FAM43AQ8N2R8 423 aa22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 CRACR2BQ8N4Y2 399 aaPredicted RBP22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 ZFYVE28Q9HCC9 887 aa22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 SAP30BPQ9UHR5 308 aaKnown RBP22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 PALD1Q9ULE6 856 aa22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 KCNH4Q9UQ05 1017 aa22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 ZHX2Q9Y6X8 837 aa22.22■■□□□ 1.15
SYNGR3-204ENST00000564642 BTBD19C9JJ37 291 aa22.21■■□□□ 1.15
SYNGR3-204ENST00000564642 CXCL11O14625 94 aa22.2■■□□□ 1.14
SYNGR3-204ENST00000564642 RIOK1Q9BRS2 568 aaKnown RBP22.2■■□□□ 1.14
SYNGR3-204ENST00000564642 ZCCHC17Q9NP64 241 aaKnown RBP22.2■■□□□ 1.14
SYNGR3-204ENST00000564642 MYH7P12883 1935 aa22.19■■□□□ 1.14
SYNGR3-204ENST00000564642 CRNKL1Q9BZJ0 848 aaKnown RBP22.19■■□□□ 1.14
SYNGR3-204ENST00000564642 SUPT16HQ9Y5B9 1047 aaKnown RBP22.19■■□□□ 1.14
SYNGR3-204ENST00000564642 ATAD5Q96QE3 1844 aa22.19■■□□□ 1.14
SYNGR3-204ENST00000564642 SIPA1L1O43166 1804 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 TCRBV5S4A2TA0A5A2 114 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 ADD2P35612 726 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 CAP2P40123 477 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 SLC4A8Q2Y0W8 1093 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 GCC1Q96CN9 775 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 AFG3L2Q9Y4W6 797 aa22.18■■□□□ 1.14
SYNGR3-204ENST00000564642 TNRC18O15417 2968 aaPredicted RBP22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 HDAC1Q13547 482 aaPredicted RBP22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 PKN2Q16513 984 aaKnown RBP22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 ANKRD45Q5TZF3 282 aa22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 FASTKD5Q7L8L6 764 aaKnown RBP22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 ANKRD23Q86SG2 305 aa22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 TTC6Q86TZ1 520 aa22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 PHIPQ8WWQ0 1821 aa22.17■■□□□ 1.14
SYNGR3-204ENST00000564642 SP3Q02447 781 aa22.16■■□□□ 1.14
SYNGR3-204ENST00000564642 TSHZ3Q63HK5 1081 aa22.16■■□□□ 1.14
SYNGR3-204ENST00000564642 METTL16Q86W50 562 aaKnown RBP22.16■■□□□ 1.14
SYNGR3-204ENST00000564642 ERO1AQ96HE7 468 aa22.16■■□□□ 1.14
SYNGR3-204ENST00000564642 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.16■■□□□ 1.14
SYNGR3-204ENST00000564642 TTC41PQ6P2S7 1318 aa22.15■■□□□ 1.14
SYNGR3-204ENST00000564642 TRIM75PA6NK02 468 aa22.15■■□□□ 1.14
SYNGR3-204ENST00000564642 PDHXO00330 501 aa22.15■■□□□ 1.14
SYNGR3-204ENST00000564642 ERC2O15083 957 aa22.15■■□□□ 1.14
SYNGR3-204ENST00000564642 POLR3DP05423 398 aaPredicted RBP22.15■■□□□ 1.14
SYNGR3-204ENST00000564642 UBE3CQ15386 1083 aa22.15■■□□□ 1.14
SYNGR3-204ENST00000564642 TBC1D2Q9BYX2 928 aa22.15■■□□□ 1.14
SYNGR3-204ENST00000564642 A0A0G2JLL6 359 aaPredicted RBP22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 USP17L5A8MUK1 530 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 TLR2O60603 784 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 RRP1BQ14684 758 aaKnown RBP22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 SLFNL1Q499Z3 407 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 GADL1Q6ZQY3 521 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 PRRT2Q7Z6L0 340 aaPredicted RBP22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 CCDC84Q86UT8 332 aaPredicted RBP22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 LCORLQ8N3X6 602 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 RWDD1Q9H446 243 aaPredicted RBP22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 DNAJC18Q9H819 358 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 ARMT1Q9H993 441 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 AS3MTQ9HBK9 375 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 SERPINB13Q9UIV8 391 aa22.14■■□□□ 1.13
SYNGR3-204ENST00000564642 NAV1Q8NEY1 1877 aa22.13■■□□□ 1.13
SYNGR3-204ENST00000564642 MBD4O95243 580 aa22.13■■□□□ 1.13
SYNGR3-204ENST00000564642 ASNSP08243 561 aa22.13■■□□□ 1.13
SYNGR3-204ENST00000564642 MOGSQ13724 837 aa22.13■■□□□ 1.13
SYNGR3-204ENST00000564642 SDR42E1Q8WUS8 393 aa22.13■■□□□ 1.13
SYNGR3-204ENST00000564642 MCM9Q9NXL9 1143 aa22.13■■□□□ 1.13
SYNGR3-204ENST00000564642 PTPRFP10586 1907 aa22.13■■□□□ 1.13
SYNGR3-204ENST00000564642 MX1P20591 662 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 SPP2Q13103 211 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 KBTBD3Q8NAB2 608 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 ZNF280CQ8ND82 737 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 CD99L2Q8TCZ2 262 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 EHD4Q9H223 541 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 GINM1Q9NU53 330 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 TRIM17Q9Y577 477 aa22.12■■□□□ 1.13
SYNGR3-204ENST00000564642 GLRX3O76003 335 aaKnown RBP22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 GDF11O95390 407 aa22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 CHGBP05060 677 aa22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 ARHGEF6Q15052 776 aa22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 GPAT2Q6NUI2 795 aa22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 OTUD7AQ8TE49 926 aaPredicted RBP22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 DCP1AQ9NPI6 582 aaPredicted RBP22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 ATP8A2Q9NTI2 1148 aa22.11■■□□□ 1.13
SYNGR3-204ENST00000564642 PLCD1P51178 756 aa22.1■■□□□ 1.13
SYNGR3-204ENST00000564642 KIF22Q14807 665 aa22.1■■□□□ 1.13
SYNGR3-204ENST00000564642 LRRFIP1Q32MZ4 808 aaKnown RBP22.1■■□□□ 1.13
SYNGR3-204ENST00000564642 PDE4DIPQ5VU43 2346 aa22.1■■□□□ 1.13
SYNGR3-204ENST00000564642 FBXO46Q6PJ61 603 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms