RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZSCAN25Q6NSZ9 544 aa24.04■■□□□ 1.44
CMTM3-207ENST00000564060 GCC1Q96CN9 775 aa24.04■■□□□ 1.44
CMTM3-207ENST00000564060 PTPN18Q99952 460 aa24.04■■□□□ 1.44
CMTM3-207ENST00000564060 KCNH4Q9UQ05 1017 aa24.04■■□□□ 1.44
CMTM3-207ENST00000564060 ZNF532Q9HCE3 1301 aa24.04■■□□□ 1.44
CMTM3-207ENST00000564060 DDX60LQ5H9U9 1706 aaKnown RBP24.04■■□□□ 1.44
CMTM3-207ENST00000564060 FOXP4Q8IVH2 680 aaPredicted RBP24.03■■□□□ 1.44
CMTM3-207ENST00000564060 ZNF296Q8WUU4 475 aaPredicted RBP24.03■■□□□ 1.44
CMTM3-207ENST00000564060 CXCL11O14625 94 aa24.02■■□□□ 1.44
CMTM3-207ENST00000564060 FKTNO75072 461 aa24.02■■□□□ 1.44
CMTM3-207ENST00000564060 DGKZQ13574 1117 aa24.02■■□□□ 1.44
CMTM3-207ENST00000564060 CRACR2BQ8N4Y2 399 aaPredicted RBP24.02■■□□□ 1.44
CMTM3-207ENST00000564060 EDC3Q96F86 508 aaKnown RBP24.02■■□□□ 1.44
CMTM3-207ENST00000564060 RIOK1Q9BRS2 568 aaKnown RBP24.02■■□□□ 1.44
CMTM3-207ENST00000564060 CRNKL1Q9BZJ0 848 aaKnown RBP24.02■■□□□ 1.44
CMTM3-207ENST00000564060 TTC41PQ6P2S7 1318 aa24.02■■□□□ 1.44
CMTM3-207ENST00000564060 ERC2O15083 957 aa24.01■■□□□ 1.43
CMTM3-207ENST00000564060 PTPRAP18433 802 aa24.01■■□□□ 1.43
CMTM3-207ENST00000564060 ADD2P35612 726 aa24.01■■□□□ 1.43
CMTM3-207ENST00000564060 CRHR2Q13324 411 aa24.01■■□□□ 1.43
CMTM3-207ENST00000564060 TAF1CQ15572 869 aaPredicted RBP24.01■■□□□ 1.43
CMTM3-207ENST00000564060 CTU1Q7Z7A3 348 aaKnown RBP24.01■■□□□ 1.43
CMTM3-207ENST00000564060 TBC1D2Q9BYX2 928 aa24.01■■□□□ 1.43
CMTM3-207ENST00000564060 ZFYVE28Q9HCC9 887 aa24.01■■□□□ 1.43
CMTM3-207ENST00000564060 MYH8P13535 1937 aa24.01■■□□□ 1.43
CMTM3-207ENST00000564060 TCRBV5S4A2TA0A5A2 114 aa24■■□□□ 1.43
CMTM3-207ENST00000564060 PALD1Q9ULE6 856 aa24■■□□□ 1.43
CMTM3-207ENST00000564060 ZHX2Q9Y6X8 837 aa24■■□□□ 1.43
CMTM3-207ENST00000564060 FAM196BA6NMK8 535 aa23.99■■□□□ 1.43
CMTM3-207ENST00000564060 UBE3CQ15386 1083 aa23.99■■□□□ 1.43
CMTM3-207ENST00000564060 TTC6Q86TZ1 520 aa23.99■■□□□ 1.43
CMTM3-207ENST00000564060 METTL16Q86W50 562 aaKnown RBP23.99■■□□□ 1.43
CMTM3-207ENST00000564060 FAM43AQ8N2R8 423 aa23.99■■□□□ 1.43
CMTM3-207ENST00000564060 MCOLN1Q9GZU1 580 aa23.99■■□□□ 1.43
CMTM3-207ENST00000564060 SAP30BPQ9UHR5 308 aaKnown RBP23.99■■□□□ 1.43
CMTM3-207ENST00000564060 CAP2P40123 477 aa23.98■■□□□ 1.43
CMTM3-207ENST00000564060 LRRFIP1Q32MZ4 808 aaKnown RBP23.98■■□□□ 1.43
CMTM3-207ENST00000564060 FASTKD5Q7L8L6 764 aaKnown RBP23.98■■□□□ 1.43
CMTM3-207ENST00000564060 ANKRD23Q86SG2 305 aa23.98■■□□□ 1.43
CMTM3-207ENST00000564060 RWDD1Q9H446 243 aaPredicted RBP23.98■■□□□ 1.43
CMTM3-207ENST00000564060 GINM1Q9NU53 330 aa23.98■■□□□ 1.43
CMTM3-207ENST00000564060 SUPT16HQ9Y5B9 1047 aaKnown RBP23.98■■□□□ 1.43
CMTM3-207ENST00000564060 BTBD19C9JJ37 291 aa23.97■■□□□ 1.43
CMTM3-207ENST00000564060 SLURP2P0DP57 97 aa23.97■■□□□ 1.43
CMTM3-207ENST00000564060 PKN2Q16513 984 aaKnown RBP23.97■■□□□ 1.43
CMTM3-207ENST00000564060 KBTBD3Q8NAB2 608 aa23.97■■□□□ 1.43
CMTM3-207ENST00000564060 ABHD8Q96I13 439 aa23.97■■□□□ 1.43
CMTM3-207ENST00000564060 EHD4Q9H223 541 aa23.97■■□□□ 1.43
CMTM3-207ENST00000564060 R3HDMLQ9H3Y0 253 aa23.97■■□□□ 1.43
CMTM3-207ENST00000564060 BAZ2AQ9UIF9 1905 aaKnown RBP23.97■■□□□ 1.43
CMTM3-207ENST00000564060 AFG3L2Q9Y4W6 797 aa23.97■■□□□ 1.43
CMTM3-207ENST00000564060 GLRX3O76003 335 aaKnown RBP23.96■■□□□ 1.43
CMTM3-207ENST00000564060 ASNSP08243 561 aa23.96■■□□□ 1.43
CMTM3-207ENST00000564060 MX1P20591 662 aa23.96■■□□□ 1.43
CMTM3-207ENST00000564060 ANKRD45Q5TZF3 282 aa23.96■■□□□ 1.43
CMTM3-207ENST00000564060 ERO1AQ96HE7 468 aa23.96■■□□□ 1.43
CMTM3-207ENST00000564060 AS3MTQ9HBK9 375 aa23.96■■□□□ 1.43
CMTM3-207ENST00000564060 SERPINB13Q9UIV8 391 aa23.96■■□□□ 1.43
CMTM3-207ENST00000564060 LOC285556D6RIA3 1793 aa23.96■■□□□ 1.43
CMTM3-207ENST00000564060 A0A0G2JLL6 359 aaPredicted RBP23.95■■□□□ 1.42
CMTM3-207ENST00000564060 PRRT2Q7Z6L0 340 aaPredicted RBP23.95■■□□□ 1.42
CMTM3-207ENST00000564060 LCORLQ8N3X6 602 aa23.95■■□□□ 1.42
CMTM3-207ENST00000564060 POLR3DP05423 398 aaPredicted RBP23.94■■□□□ 1.42
CMTM3-207ENST00000564060 ZFYP08048 801 aaPredicted RBP23.94■■□□□ 1.42
CMTM3-207ENST00000564060 SP3Q02447 781 aa23.94■■□□□ 1.42
CMTM3-207ENST00000564060 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
CMTM3-207ENST00000564060 DDRGK1Q96HY6 314 aa23.94■■□□□ 1.42
CMTM3-207ENST00000564060 DNAJC18Q9H819 358 aa23.94■■□□□ 1.42
CMTM3-207ENST00000564060 TRIM75PA6NK02 468 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 USP17L5A8MUK1 530 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 TLR2O60603 784 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 CAPN15O75808 1086 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 MBD4O95243 580 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 ARHGEF6Q15052 776 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 TSHZ3Q63HK5 1081 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 ARMT1Q9H993 441 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 ATP8A2Q9NTI2 1148 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 TAOK2Q9UL54 1235 aa23.93■■□□□ 1.42
CMTM3-207ENST00000564060 PDHXO00330 501 aa23.92■■□□□ 1.42
CMTM3-207ENST00000564060 SLC4A8Q2Y0W8 1093 aa23.92■■□□□ 1.42
CMTM3-207ENST00000564060 AMOTL1Q8IY63 956 aa23.92■■□□□ 1.42
CMTM3-207ENST00000564060 ZNF280CQ8ND82 737 aa23.92■■□□□ 1.42
CMTM3-207ENST00000564060 PI4K2BQ8TCG2 481 aa23.92■■□□□ 1.42
CMTM3-207ENST00000564060 PARK7Q99497 189 aaKnown RBP23.92■■□□□ 1.42
CMTM3-207ENST00000564060 DCP1AQ9NPI6 582 aaPredicted RBP23.92■■□□□ 1.42
CMTM3-207ENST00000564060 MCM9Q9NXL9 1143 aa23.92■■□□□ 1.42
CMTM3-207ENST00000564060 MOGSQ13724 837 aa23.91■■□□□ 1.42
CMTM3-207ENST00000564060 GADL1Q6ZQY3 521 aa23.91■■□□□ 1.42
CMTM3-207ENST00000564060 SMC5Q8IY18 1101 aa23.91■■□□□ 1.42
CMTM3-207ENST00000564060 SDR42E1Q8WUS8 393 aa23.91■■□□□ 1.42
CMTM3-207ENST00000564060 SLC45A1Q9Y2W3 748 aa23.91■■□□□ 1.42
CMTM3-207ENST00000564060 PROCA1Q8NCQ7 364 aaPredicted RBP23.9■■□□□ 1.42
CMTM3-207ENST00000564060 APPBP2Q92624 585 aa23.9■■□□□ 1.42
CMTM3-207ENST00000564060 SALL3Q9BXA9 1300 aa23.89■■□□□ 1.42
CMTM3-207ENST00000564060 SPP2Q13103 211 aa23.89■■□□□ 1.41
CMTM3-207ENST00000564060 RRP1BQ14684 758 aaKnown RBP23.89■■□□□ 1.41
CMTM3-207ENST00000564060 TATDN1Q6P1N9 297 aa23.89■■□□□ 1.41
CMTM3-207ENST00000564060 OTUD7AQ8TE49 926 aaPredicted RBP23.89■■□□□ 1.41
CMTM3-207ENST00000564060 WDR18Q9BV38 432 aa23.89■■□□□ 1.41
CMTM3-207ENST00000564060 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms