RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 PALM3A6NDB9 673 aaPredicted RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 PABPN1LA6NDY0 278 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 EFCAB8A8MWE9 144 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 BIN1O00499 593 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 STAM2O75886 525 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 NPTXRO95502 500 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 PARP1P09874 1014 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 LMNB1P20700 586 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 CLCN2P51788 898 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 CBX3Q13185 183 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 DRP2Q13474 957 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 PDE3AQ14432 1141 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 SUZ12Q15022 739 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 TRIM71Q2Q1W2 868 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 BOLA3Q53S33 107 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 BEND6Q5SZJ8 279 aaPredicted RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 CEP85LQ5SZL2 805 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 THOC7Q6I9Y2 204 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 GALNT17Q6IS24 598 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 FAM228AQ86W67 206 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 CEP57L1Q8IYX8 460 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 SAMD14Q8IZD0 417 aaPredicted RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 LRRC43Q8N309 656 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 CCDC82Q8N4S0 544 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 ESX1Q8N693 406 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 GPR161Q8N6U8 529 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 TMEM87AQ8NBN3 555 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 ZNF280CQ8ND82 737 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 GCC1Q96CN9 775 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 HVCN1Q96D96 273 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 SNX27Q96L92 541 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 IWS1Q96ST2 819 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 CGREF1Q99674 301 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 C2orf49Q9BVC5 232 aaPredicted RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 DHX36Q9H2U1 1008 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 VCX3BQ9H321 246 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 SYNCQ9H7C4 482 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 DCAF16Q9NXF7 216 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 PCSK1NQ9UHG2 260 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 DNAI1Q9UI46 699 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 MAFFQ9ULX9 164 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 NSFL1CQ9UNZ2 370 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 DIS3Q9Y2L1 958 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 NOSIPQ9Y314 301 aaKnown RBP5.58□□□□□ -1.52
TCF4-215ENST00000562638 SYNMO15061 1565 aa5.58□□□□□ -1.52
TCF4-215ENST00000562638 ZNF521Q96K83 1311 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 MYBBP1AQ9BQG0 1328 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 TARSL2A2RTX5 802 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 CCDC151A5D8V7 595 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 ANKRD65E5RJM6 399 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 STK25O00506 426 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 ARHGAP33O14559 1287 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 WDR46O15213 610 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 PRPF40AO75400 957 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 PARNO95453 639 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 GNAT1P11488 350 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 ATP5JP18859 108 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 BTF3P20290 206 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 ENDOUP21128 410 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 PTGS1P23219 599 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 CCNCP24863 283 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 PRKAR2BP31323 418 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 S100A5P33763 92 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 HOXD12P35452 270 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 USP5P45974 858 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 SULT2A1Q06520 285 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 BRD3Q15059 726 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 PTPN14Q15678 1187 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 TPD52L1Q16890 204 aaPredicted RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 ALDH1L2Q3SY69 923 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 CCDC14Q49A88 953 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 CCDC122Q5T0U0 273 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 KANK4Q5T7N3 995 aaPredicted RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 NBPF14Q5TI25 921 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 MAATS1Q7Z4T9 603 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 LURAP1LQ8IV03 231 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 SYCP3Q8IZU3 236 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 LSMEM2Q8N112 164 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 SYT2Q8N9I0 419 aaPredicted RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 ACMSDQ8TDX5 336 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 SREK1Q8WXA9 508 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 CDCA7LQ96GN5 454 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 GPATCH3Q96I76 525 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 CLIC6Q96NY7 704 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 UIMC1Q96RL1 719 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 NAP1L3Q99457 506 aaPredicted RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 CDCA7Q9BWT1 371 aaPredicted RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 NACAP1Q9BZK3 213 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 UBE2OQ9C0C9 1292 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 LNPKQ9C0E8 428 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 BHMT2Q9H2M3 363 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 RABEP2Q9H5N1 569 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 VCPKMTQ9H867 229 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 NLRP2Q9NX02 1062 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 KIAA1522Q9P206 1035 aaPredicted RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 KLHL42Q9P2K6 505 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 WDR35Q9P2L0 1181 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 HCSTQ9UBK5 93 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms