RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 FOXP4Q8IVH2 680 aaPredicted RBP22.62■■□□□ 1.21
PKD1-223ENST00000561668 CRACR2BQ8N4Y2 399 aaPredicted RBP22.62■■□□□ 1.21
PKD1-223ENST00000561668 MCOLN1Q9GZU1 580 aa22.62■■□□□ 1.21
PKD1-223ENST00000561668 ZFYVE28Q9HCC9 887 aa22.62■■□□□ 1.21
PKD1-223ENST00000561668 STAP2Q9UGK3 403 aa22.62■■□□□ 1.21
PKD1-223ENST00000561668 ZHX2Q9Y6X8 837 aa22.62■■□□□ 1.21
PKD1-223ENST00000561668 FLT1P17948 1338 aa22.61■■□□□ 1.21
PKD1-223ENST00000561668 COL2A1P02458 1487 aaPredicted RBP22.61■■□□□ 1.21
PKD1-223ENST00000561668 PDE6AP16499 860 aa22.61■■□□□ 1.21
PKD1-223ENST00000561668 NUCB1Q02818 461 aa22.61■■□□□ 1.21
PKD1-223ENST00000561668 TAF1CQ15572 869 aaPredicted RBP22.61■■□□□ 1.21
PKD1-223ENST00000561668 CTU1Q7Z7A3 348 aaKnown RBP22.61■■□□□ 1.21
PKD1-223ENST00000561668 ABHD8Q96I13 439 aa22.61■■□□□ 1.21
PKD1-223ENST00000561668 CXCL11O14625 94 aa22.6■■□□□ 1.21
PKD1-223ENST00000561668 PTPRAP18433 802 aa22.6■■□□□ 1.21
PKD1-223ENST00000561668 CRHR2Q13324 411 aa22.6■■□□□ 1.21
PKD1-223ENST00000561668 ZSCAN25Q6NSZ9 544 aa22.6■■□□□ 1.21
PKD1-223ENST00000561668 PI4K2BQ8TCG2 481 aa22.6■■□□□ 1.21
PKD1-223ENST00000561668 R3HDMLQ9H3Y0 253 aa22.6■■□□□ 1.21
PKD1-223ENST00000561668 SAP30BPQ9UHR5 308 aaKnown RBP22.6■■□□□ 1.21
PKD1-223ENST00000561668 PALD1Q9ULE6 856 aa22.6■■□□□ 1.21
PKD1-223ENST00000561668 ZNF532Q9HCE3 1301 aa22.59■■□□□ 1.21
PKD1-223ENST00000561668 OTUD7AQ8TE49 926 aaPredicted RBP22.59■■□□□ 1.21
PKD1-223ENST00000561668 EDC3Q96F86 508 aaKnown RBP22.59■■□□□ 1.21
PKD1-223ENST00000561668 CRNKL1Q9BZJ0 848 aaKnown RBP22.59■■□□□ 1.21
PKD1-223ENST00000561668 ZCCHC17Q9NP64 241 aaKnown RBP22.59■■□□□ 1.21
PKD1-223ENST00000561668 KCNH4Q9UQ05 1017 aa22.59■■□□□ 1.21
PKD1-223ENST00000561668 FAM196BA6NMK8 535 aa22.58■■□□□ 1.21
PKD1-223ENST00000561668 SLURP2P0DP57 97 aa22.58■■□□□ 1.21
PKD1-223ENST00000561668 PKN2Q16513 984 aaKnown RBP22.58■■□□□ 1.21
PKD1-223ENST00000561668 FASTKD5Q7L8L6 764 aaKnown RBP22.58■■□□□ 1.21
PKD1-223ENST00000561668 TTC6Q86TZ1 520 aa22.58■■□□□ 1.21
PKD1-223ENST00000561668 FAM43AQ8N2R8 423 aa22.58■■□□□ 1.21
PKD1-223ENST00000561668 BTBD19C9JJ37 291 aa22.57■■□□□ 1.2
PKD1-223ENST00000561668 MX1P20591 662 aa22.57■■□□□ 1.2
PKD1-223ENST00000561668 CHD1LQ86WJ1 897 aa22.57■■□□□ 1.2
PKD1-223ENST00000561668 LAMB1P07942 1786 aa22.57■■□□□ 1.2
PKD1-223ENST00000561668 ERC2O15083 957 aa22.56■■□□□ 1.2
PKD1-223ENST00000561668 GLRX3O76003 335 aaKnown RBP22.56■■□□□ 1.2
PKD1-223ENST00000561668 CENPBP07199 599 aaPredicted RBP22.56■■□□□ 1.2
PKD1-223ENST00000561668 CAP2P40123 477 aa22.56■■□□□ 1.2
PKD1-223ENST00000561668 SP3Q02447 781 aa22.56■■□□□ 1.2
PKD1-223ENST00000561668 ARHGEF6Q15052 776 aa22.56■■□□□ 1.2
PKD1-223ENST00000561668 ANKRD23Q86SG2 305 aa22.56■■□□□ 1.2
PKD1-223ENST00000561668 ERO1AQ96HE7 468 aa22.56■■□□□ 1.2
PKD1-223ENST00000561668 RIOK1Q9BRS2 568 aaKnown RBP22.56■■□□□ 1.2
PKD1-223ENST00000561668 AFG3L2Q9Y4W6 797 aa22.56■■□□□ 1.2
PKD1-223ENST00000561668 TCRBV5S4A2TA0A5A2 114 aa22.55■■□□□ 1.2
PKD1-223ENST00000561668 CCDC85CA6NKD9 419 aa22.55■■□□□ 1.2
PKD1-223ENST00000561668 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
PKD1-223ENST00000561668 ADD2P35612 726 aa22.55■■□□□ 1.2
PKD1-223ENST00000561668 PDE1AP54750 535 aa22.55■■□□□ 1.2
PKD1-223ENST00000561668 TBC1D2Q9BYX2 928 aa22.55■■□□□ 1.2
PKD1-223ENST00000561668 OSBPL3Q9H4L5 887 aa22.55■■□□□ 1.2
PKD1-223ENST00000561668 PDHXO00330 501 aa22.54■■□□□ 1.2
PKD1-223ENST00000561668 UBE3CQ15386 1083 aa22.54■■□□□ 1.2
PKD1-223ENST00000561668 SLC4A8Q2Y0W8 1093 aa22.54■■□□□ 1.2
PKD1-223ENST00000561668 LNPKQ9C0E8 428 aa22.54■■□□□ 1.2
PKD1-223ENST00000561668 AS3MTQ9HBK9 375 aa22.54■■□□□ 1.2
PKD1-223ENST00000561668 TRIM75PA6NK02 468 aa22.53■■□□□ 1.2
PKD1-223ENST00000561668 USP17L5A8MUK1 530 aa22.53■■□□□ 1.2
PKD1-223ENST00000561668 LRRFIP1Q32MZ4 808 aaKnown RBP22.53■■□□□ 1.2
PKD1-223ENST00000561668 GADL1Q6ZQY3 521 aa22.53■■□□□ 1.2
PKD1-223ENST00000561668 METTL16Q86W50 562 aaKnown RBP22.53■■□□□ 1.2
PKD1-223ENST00000561668 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
PKD1-223ENST00000561668 DDRGK1Q96HY6 314 aa22.53■■□□□ 1.2
PKD1-223ENST00000561668 TLR2O60603 784 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 ASNSP08243 561 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 KIF22Q14807 665 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 TSHZ3Q63HK5 1081 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 B4GALNT3Q6L9W6 998 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 ZNF280CQ8ND82 737 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 GINM1Q9NU53 330 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 MCM9Q9NXL9 1143 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 SERPINB13Q9UIV8 391 aa22.52■■□□□ 1.2
PKD1-223ENST00000561668 A0A0G2JLL6 359 aaPredicted RBP22.51■■□□□ 1.19
PKD1-223ENST00000561668 SPP2Q13103 211 aa22.51■■□□□ 1.19
PKD1-223ENST00000561668 PRRT2Q7Z6L0 340 aaPredicted RBP22.51■■□□□ 1.19
PKD1-223ENST00000561668 TICAM2Q86XR7 235 aa22.51■■□□□ 1.19
PKD1-223ENST00000561668 PLEKHM2Q8IWE5 1019 aa22.51■■□□□ 1.19
PKD1-223ENST00000561668 AMOTL1Q8IY63 956 aa22.51■■□□□ 1.19
PKD1-223ENST00000561668 ARMT1Q9H993 441 aa22.51■■□□□ 1.19
PKD1-223ENST00000561668 FOCADQ5VW36 1801 aa22.51■■□□□ 1.19
PKD1-223ENST00000561668 CDK5RAP2Q96SN8 1893 aa22.5■■□□□ 1.19
PKD1-223ENST00000561668 MBD4O95243 580 aa22.5■■□□□ 1.19
PKD1-223ENST00000561668 LCORLQ8N3X6 602 aa22.5■■□□□ 1.19
PKD1-223ENST00000561668 CD99L2Q8TCZ2 262 aa22.5■■□□□ 1.19
PKD1-223ENST00000561668 PARK7Q99497 189 aaKnown RBP22.5■■□□□ 1.19
PKD1-223ENST00000561668 EHD4Q9H223 541 aa22.5■■□□□ 1.19
PKD1-223ENST00000561668 ATP8A2Q9NTI2 1148 aa22.5■■□□□ 1.19
PKD1-223ENST00000561668 TRIM17Q9Y577 477 aa22.5■■□□□ 1.19
PKD1-223ENST00000561668 DOCK1Q14185 1865 aa22.49■■□□□ 1.19
PKD1-223ENST00000561668 CCDC84Q86UT8 332 aaPredicted RBP22.49■■□□□ 1.19
PKD1-223ENST00000561668 SDR42E1Q8WUS8 393 aa22.49■■□□□ 1.19
PKD1-223ENST00000561668 EFCC1Q9HA90 598 aa22.49■■□□□ 1.19
PKD1-223ENST00000561668 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.49■■□□□ 1.19
PKD1-223ENST00000561668 MYH1P12882 1939 aa22.49■■□□□ 1.19
PKD1-223ENST00000561668 ZFYP08048 801 aaPredicted RBP22.48■■□□□ 1.19
PKD1-223ENST00000561668 MOGSQ13724 837 aa22.48■■□□□ 1.19
PKD1-223ENST00000561668 RRP1BQ14684 758 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms