RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 KCT2Q8NC54 265 aa7.93□□□□□ -1.14
USP8-218ENST00000561330 TBC1D32Q96NH3 1257 aa7.93□□□□□ -1.14
USP8-218ENST00000561330 WNT10AQ9GZT5 417 aa7.93□□□□□ -1.14
USP8-218ENST00000561330 TACC3Q9Y6A5 838 aa7.93□□□□□ -1.14
USP8-218ENST00000561330 FAM221AA4D161 298 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 GARTP22102 1010 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 NTF4P34130 210 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 ETF1P62495 437 aaKnown RBP7.92□□□□□ -1.14
USP8-218ENST00000561330 SEZ6L2Q6UXD5 910 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 USP48Q86UV5 1035 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 SHKBP1Q8TBC3 707 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 ZNF296Q8WUU4 475 aaPredicted RBP7.92□□□□□ -1.14
USP8-218ENST00000561330 C1GALT1Q9NS00 363 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 ATG3Q9NT62 314 aa7.92□□□□□ -1.14
USP8-218ENST00000561330 SUPT16HQ9Y5B9 1047 aaKnown RBP7.92□□□□□ -1.14
USP8-218ENST00000561330 WDR64B1ANS9 1081 aa7.91□□□□□ -1.14
USP8-218ENST00000561330 ADMP35318 185 aa7.91□□□□□ -1.14
USP8-218ENST00000561330 FBXL19Q6PCT2 694 aa7.91□□□□□ -1.14
USP8-218ENST00000561330 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
USP8-218ENST00000561330 ZAR1Q86SH2 424 aa7.91□□□□□ -1.14
USP8-218ENST00000561330 KCNQ5Q9NR82 932 aa7.91□□□□□ -1.14
USP8-218ENST00000561330 F13BP05160 661 aa7.9□□□□□ -1.14
USP8-218ENST00000561330 GRK4P32298 578 aa7.9□□□□□ -1.14
USP8-218ENST00000561330 PDE4BQ07343 736 aa7.9□□□□□ -1.14
USP8-218ENST00000561330 CDK5R2Q13319 367 aa7.9□□□□□ -1.14
USP8-218ENST00000561330 ZNF394Q53GI3 561 aa7.9□□□□□ -1.14
USP8-218ENST00000561330 ZDHHC13Q8IUH4 622 aa7.9□□□□□ -1.14
USP8-218ENST00000561330 ADAMTS1Q9UHI8 967 aa7.9□□□□□ -1.14
USP8-218ENST00000561330 ROBO2Q9HCK4 1378 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 TLR3O15455 904 aaKnown RBP7.89□□□□□ -1.15
USP8-218ENST00000561330 GREM1O60565 184 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 HDLBPQ00341 1268 aaKnown RBP7.89□□□□□ -1.15
USP8-218ENST00000561330 CYP27A1Q02318 531 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 MPP2Q14168 576 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 DUSP27Q5VZP5 1158 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 UBE3DQ7Z6J8 389 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 METTL16Q86W50 562 aaKnown RBP7.89□□□□□ -1.15
USP8-218ENST00000561330 KIAA0825Q8IV33 1275 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 HID1Q8IV36 788 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 GATA6Q92908 595 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 SPON2Q9BUD6 331 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 METTL22Q9BUU2 404 aaPredicted RBP7.89□□□□□ -1.15
USP8-218ENST00000561330 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 PCDHGB7Q9Y5F8 929 aa7.89□□□□□ -1.15
USP8-218ENST00000561330 FAM170BA6NMN3 283 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 PGRP06401 933 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 CWF19L2Q2TBE0 894 aaKnown RBP7.88□□□□□ -1.15
USP8-218ENST00000561330 C9orf131Q5VYM1 1079 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 OGFOD3Q6PK18 319 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 NT5DC4Q86YG4 428 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 SHISA5Q8N114 240 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 FBXO27Q8NI29 283 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 DDX41Q9UJV9 622 aaKnown RBP7.88□□□□□ -1.15
USP8-218ENST00000561330 RNF112Q9ULX5 631 aa7.88□□□□□ -1.15
USP8-218ENST00000561330 E9PSI1 815 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 FAM87AP0C7U9 286 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
USP8-218ENST00000561330 ZMYM1Q5SVZ6 1142 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 ARMCX6Q7L4S7 300 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 REC114Q7Z4M0 266 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 ZNF654Q8IZM8 581 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 LRRC3Q9BY71 257 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 FBRSQ9HAH7 460 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 LEMD3Q9Y2U8 911 aa7.87□□□□□ -1.15
USP8-218ENST00000561330 PRR19A6NJB7 356 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 LRIG2O94898 1065 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 TGFB1P01137 390 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 PLCG1P19174 1290 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 APOBRQ0VD83 1088 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 SLBPQ14493 270 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP8-218ENST00000561330 CYP27C1Q4G0S4 372 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 ZNF765Q7L2R6 523 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 NT5C1AQ9BXI3 368 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 PRDM10Q9NQV6 1147 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 UBP1Q9NZI7 540 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 PIM2Q9P1W9 311 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 ADAM30Q9UKF2 790 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 CORINQ9Y5Q5 1042 aa7.86□□□□□ -1.15
USP8-218ENST00000561330 GRIN3BO60391 1043 aa7.85□□□□□ -1.15
USP8-218ENST00000561330 CAP2P40123 477 aa7.85□□□□□ -1.15
USP8-218ENST00000561330 RACK1P63244 317 aaKnown RBP7.85□□□□□ -1.15
USP8-218ENST00000561330 NKG7Q16617 165 aa7.85□□□□□ -1.15
USP8-218ENST00000561330 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
USP8-218ENST00000561330 DUSP23Q9BVJ7 150 aa7.85□□□□□ -1.15
USP8-218ENST00000561330 FOXQ1Q9C009 403 aa7.85□□□□□ -1.15
USP8-218ENST00000561330 POLR3KQ9Y2Y1 108 aaPredicted RBP7.85□□□□□ -1.15
USP8-218ENST00000561330 LEFTY1O75610 366 aa7.84□□□□□ -1.15
USP8-218ENST00000561330 CST3P01034 146 aaPredicted RBP7.84□□□□□ -1.15
USP8-218ENST00000561330 TCF3P15923 654 aa7.84□□□□□ -1.15
USP8-218ENST00000561330 GRIK1P39086 918 aa7.84□□□□□ -1.15
USP8-218ENST00000561330 CRKP46108 304 aa7.84□□□□□ -1.15
USP8-218ENST00000561330 SEZ6Q53EL9 994 aa7.84□□□□□ -1.15
USP8-218ENST00000561330 MRPL41Q8IXM3 137 aaKnown RBP7.84□□□□□ -1.15
USP8-218ENST00000561330 EAF1Q96JC9 268 aaPredicted RBP7.84□□□□□ -1.15
USP8-218ENST00000561330 BRMS1Q9HCU9 246 aa7.84□□□□□ -1.15
USP8-218ENST00000561330 TJP2Q9UDY2 1190 aa7.84□□□□□ -1.15
USP8-218ENST00000561330 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.84□□□□□ -1.15
USP8-218ENST00000561330 PRR36Q9H6K5 1346 aa7.83□□□□□ -1.16
USP8-218ENST00000561330 COBLO75128 1261 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms