RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 PPP2R3BQ9Y5P8 575 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 POLR2AP24928 1970 aaKnown RBP16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 GABPAQ06546 454 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 ADCK5Q3MIX3 580 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 MFSD6Q6ZSS7 791 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 C16orf86Q6ZW13 317 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 FOXP4Q8IVH2 680 aaPredicted RBP16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 ZSCAN29Q8IWY8 852 aaPredicted RBP16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 TEPSINQ96N21 525 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 TMEM39BQ9GZU3 492 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 DEFB129Q9H1M3 183 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 TSHZ2Q9NRE2 1034 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 SERPINB13Q9UIV8 391 aa16.18■□□□□ 0.18
HMBOX1-213ENST00000560269 ORC4O43929 436 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 PSMA5P28066 241 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 PDE4BQ07343 736 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 DYNLL2Q96FJ2 89 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 JAKMIP1Q96N16 626 aaKnown RBP16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 CSRNP1Q96S65 589 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 CNNM2Q9H8M5 875 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 NEDD4P46934 1319 aa16.17■□□□□ 0.18
HMBOX1-213ENST00000560269 MYH8P13535 1937 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 HMGB1P09429 215 aaKnown RBP16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 NT5C2P49902 561 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 TRDNQ13061 729 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 EAPPQ56P03 285 aaPredicted RBP16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 NCOA7Q8NI08 942 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 KRT23Q9C075 422 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 ZNF287Q9HBT7 754 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 NMRK2Q9NPI5 230 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 HERC5Q9UII4 1024 aaKnown RBP16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 SCAF8Q9UPN6 1271 aaKnown RBP16.16■□□□□ 0.18
HMBOX1-213ENST00000560269 TBC1D12O60347 775 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 CDK8P49336 464 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 MAP3K10Q02779 954 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 RABEP1Q15276 862 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 STK11IPQ8N1F8 1099 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 IL27Q8NEV9 243 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 DNAJC18Q9H819 358 aa16.15■□□□□ 0.18
HMBOX1-213ENST00000560269 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 RUFY3Q7L099 469 aa16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 RALYLQ86SE5 291 aaKnown RBP16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 SULF1Q8IWU6 871 aa16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 MB21D2Q8IYB1 491 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 CRACR2BQ8N4Y2 399 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 ZNF526Q8TF50 670 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-213ENST00000560269 B4E1Z4 1266 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 PRDM1O75626 825 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 RASA1P20936 1047 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 RPS6KB1P23443 525 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 SHMT1P34896 483 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 COL9A3Q14050 684 aaPredicted RBP16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 NBPF12Q5TAG4 269 aaPredicted RBP16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 TATDN1Q6P1N9 297 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 DHX32Q7L7V1 743 aaKnown RBP16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 KRT26Q7Z3Y9 468 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 ESR2Q92731 530 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 HOOK2Q96ED9 719 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 MKNK2Q9HBH9 465 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 CYP46A1Q9Y6A2 500 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 WDR19Q8NEZ3 1342 aa16.13■□□□□ 0.17
HMBOX1-213ENST00000560269 ADM5C9JUS6 153 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 KDM4AO75164 1064 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 SLURP2P0DP57 97 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 CDC37L1Q7L3B6 337 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 TRIM34Q9BYJ4 488 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 UPF3BQ9BZI7 483 aaKnown RBP16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 ZSWIM5Q9P217 1185 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 SSC5DA1L4H1 1573 aa16.12■□□□□ 0.17
HMBOX1-213ENST00000560269 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 CPA1P15085 419 aa16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 MCM5P33992 734 aa16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 NEK4P51957 841 aa16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 ANTXR2P58335 489 aa16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 SUPT20HL1Q3ZLR7 823 aa16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 MTA3Q9BTC8 594 aa16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 ALDH8A1Q9H2A2 487 aaPredicted RBP16.11■□□□□ 0.17
HMBOX1-213ENST00000560269 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.11■□□□□ 0.171e-20■■■■■ 55.6
HMBOX1-213ENST00000560269 PLIN4Q96Q06 1357 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms