RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 GABPAQ06546 454 aa19.35■□□□□ 0.69
TNFAIP2-205ENST00000559406 RNF20Q5VTR2 975 aa19.35■□□□□ 0.69
TNFAIP2-205ENST00000559406 PRAMEF18Q5VWM3 479 aa19.35■□□□□ 0.69
TNFAIP2-205ENST00000559406 ANAPC15P60006 121 aa19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 STAG1Q8WVM7 1258 aa19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 DEFB129Q9H1M3 183 aa19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 PITPNM2Q9BZ72 1349 aa19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 PRDM1O75626 825 aa19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 VEGFAP15692 232 aaPredicted RBP19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 AKNAD1Q5T1N1 836 aa19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
TNFAIP2-205ENST00000559406 ADM5C9JUS6 153 aa19.33■□□□□ 0.68
TNFAIP2-205ENST00000559406 FGRP09769 529 aa19.33■□□□□ 0.68
TNFAIP2-205ENST00000559406 ZKSCAN1P17029 563 aaPredicted RBP19.33■□□□□ 0.68
TNFAIP2-205ENST00000559406 APOBEC3FQ8IUX4 373 aaKnown RBP19.33■□□□□ 0.68
TNFAIP2-205ENST00000559406 JAKMIP1Q96N16 626 aaKnown RBP19.33■□□□□ 0.68
TNFAIP2-205ENST00000559406 CSRNP1Q96S65 589 aa19.33■□□□□ 0.68
TNFAIP2-205ENST00000559406 DHX36Q9H2U1 1008 aaKnown RBP19.33■□□□□ 0.68
TNFAIP2-205ENST00000559406 SSC5DA1L4H1 1573 aa19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 C16orf86Q6ZW13 317 aa19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 TTC6Q86TZ1 520 aa19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 UPF3BQ9BZI7 483 aaKnown RBP19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 TNNI2P48788 182 aa19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 CDK8P49336 464 aa19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 TNFAIP1Q13829 316 aa19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 NBPF12Q5TAG4 269 aaPredicted RBP19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 METTL16Q86W50 562 aaKnown RBP19.32■□□□□ 0.68
TNFAIP2-205ENST00000559406 B4E1Z4 1266 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 MFSD6Q6ZSS7 791 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 CYB5R4Q7L1T6 521 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 PNMA8AQ86V59 439 aaPredicted RBP19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 AMOTL1Q8IY63 956 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 MB21D2Q8IYB1 491 aaPredicted RBP19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 ZC3H15Q8WU90 426 aaKnown RBP19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 TCEANC2Q96MN5 208 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 EHD4Q9H223 541 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 PI4KBQ9UBF8 816 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 SERPINB13Q9UIV8 391 aa19.31■□□□□ 0.68
TNFAIP2-205ENST00000559406 HLA-DOAP06340 250 aa19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 CASTP20810 708 aaKnown RBP19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 SHMT1P34896 483 aa19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 ANTXR2P58335 489 aa19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 RRP1BQ14684 758 aaKnown RBP19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 RRP12Q5JTH9 1297 aaKnown RBP19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 CHST3Q7LGC8 479 aa19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 DCPSQ96C86 337 aaKnown RBP19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 NEK1Q96PY6 1258 aa19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 ZSWIM6Q9HCJ5 1215 aa19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
TNFAIP2-205ENST00000559406 RASA1P20936 1047 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 SHROOM1Q2M3G4 852 aaPredicted RBP19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 MIGA2Q7L4E1 593 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 GLIS2Q9BZE0 524 aaPredicted RBP19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 FZD1Q9UP38 647 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 ORC4O43929 436 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 KRT32Q14532 448 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 MAP1SQ66K74 1059 aaPredicted RBP19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 KRT26Q7Z3Y9 468 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 USP48Q86UV5 1035 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 TM6SF1Q9BZW5 370 aa19.29■□□□□ 0.68
TNFAIP2-205ENST00000559406 ATAD5Q96QE3 1844 aa19.28■□□□□ 0.68
TNFAIP2-205ENST00000559406 KDM4AO75164 1064 aa19.28■□□□□ 0.68
TNFAIP2-205ENST00000559406 FMR1Q06787 632 aaKnown RBP eCLIP19.28■□□□□ 0.687e-6■■□□□ 12.8
TNFAIP2-205ENST00000559406 FAM47AQ5JRC9 791 aa19.28■□□□□ 0.68
TNFAIP2-205ENST00000559406 NCOA7Q8NI08 942 aa19.28■□□□□ 0.68
TNFAIP2-205ENST00000559406 TOMM22Q9NS69 142 aa19.28■□□□□ 0.68
TNFAIP2-205ENST00000559406 ZSWIM5Q9P217 1185 aa19.28■□□□□ 0.68
TNFAIP2-205ENST00000559406 CLEC11AQ9Y240 323 aa19.28■□□□□ 0.68
TNFAIP2-205ENST00000559406 CD2BP2O95400 341 aaKnown RBP19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 JAG1P78504 1218 aa19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 EXOSC10Q01780 885 aaKnown RBP19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 MAP3K10Q02779 954 aa19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 FOXP4Q8IVH2 680 aaPredicted RBP19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 SULF1Q8IWU6 871 aa19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 LRRC2Q9BYS8 371 aa19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 RNF41Q9H4P4 317 aaPredicted RBP19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 GPHNQ9NQX3 736 aaPredicted RBP19.27■□□□□ 0.68
TNFAIP2-205ENST00000559406 PAPPA2Q9BXP8 1791 aa19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 SLC3A2P08195 630 aaKnown RBP19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 RPS6KB1P23443 525 aa19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 PDE4BQ07343 736 aa19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 TATDN1Q6P1N9 297 aa19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 RUFY3Q7L099 469 aa19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 CRACR2BQ8N4Y2 399 aaPredicted RBP19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 TTC14Q96N46 770 aa19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 PPP2R3BQ9Y5P8 575 aa19.27■□□□□ 0.67
TNFAIP2-205ENST00000559406 BLOC1S2Q6QNY1 142 aa19.26■□□□□ 0.67
TNFAIP2-205ENST00000559406 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.26■□□□□ 0.67
TNFAIP2-205ENST00000559406 CNNM2Q9H8M5 875 aa19.26■□□□□ 0.67
TNFAIP2-205ENST00000559406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.26■□□□□ 0.67
TNFAIP2-205ENST00000559406 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
TNFAIP2-205ENST00000559406 OTOFQ9HC10 1997 aa19.25■□□□□ 0.67
TNFAIP2-205ENST00000559406 TRAF5O00463 557 aa19.25■□□□□ 0.67
TNFAIP2-205ENST00000559406 TBC1D12O60347 775 aa19.25■□□□□ 0.67
TNFAIP2-205ENST00000559406 RANBP6O60518 1105 aaKnown RBP19.25■□□□□ 0.67
TNFAIP2-205ENST00000559406 NMT2O60551 498 aa19.25■□□□□ 0.67
TNFAIP2-205ENST00000559406 PCP11498 1178 aaKnown RBP19.25■□□□□ 0.67
TNFAIP2-205ENST00000559406 AKR1B1P15121 316 aa19.25■□□□□ 0.67
TNFAIP2-205ENST00000559406 PSMA5P28066 241 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms